Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1iwaa1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Ad1iwaa2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Cd1iwac1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Cd1iwac2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Gd1iwag1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Gd1iwag2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Id1iwai1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Id1iwai2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Kd1iwak1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Kd1iwak2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Md1iwam1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Md1iwam2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Od1iwao1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Od1iwao2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Ed1iwae1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Ed1iwae2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Bd1iwab_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Dd1iwad_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Jd1iwaj_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Ld1iwal_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Nd1iwan_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Pd1iwap_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Fd1iwaf_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)
Hd1iwah_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Galdieria partita ) [TaxId: 83374 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRuBisCo, C-terminal domain 8043696 3000552 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035445 3001258 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRuBisCO, small subunit 8035846 3001622 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARuBisCO_large_Ne1iwaA1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
ARuBisCO_largee1iwaA2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
CRuBisCO_large_Ne1iwaC1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
CRuBisCO_largee1iwaC2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
GRuBisCO_large_Ne1iwaG1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
GRuBisCO_largee1iwaG2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
IRuBisCO_large_Ne1iwaI1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
IRuBisCO_largee1iwaI2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
KRuBisCO_large_Ne1iwaK1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
KRuBisCO_largee1iwaK2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
MRuBisCO_large_Ne1iwaM1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
MRuBisCO_largee1iwaM2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
ORuBisCO_large_Ne1iwaO1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
ORuBisCO_largee1iwaO2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
ERuBisCO_large_Ne1iwaE1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
ERuBisCO_largee1iwaE2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
BRuBisCO_smalle1iwaB1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
DRuBisCO_smalle1iwaD1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
JRuBisCO_smalle1iwaJ1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
LRuBisCO_smalle1iwaL1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
NRuBisCO_smalle1iwaN1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
PRuBisCO_smalle1iwaP1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
FRuBisCO_smalle1iwaF1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
HRuBisCO_smalle1iwaH1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
A3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
C3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
C3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
G3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
G3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
I3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
I3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
K3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
K3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
M3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
M3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
O3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
O3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
E3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
E3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
B3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
D3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
J3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
L3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
N3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
P3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
F3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
H3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G, I
PF02788Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)Ribulose bisphosphate carboxylase large chain, N-terminal domainThe N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold.Domain
A, C, E, G, I
PF00016Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)Ribulose bisphosphate carboxylase large chain, catalytic domainThe C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.Domain
B, D, F, H, J
PF00101Ribulose bisphosphate carboxylase, small chain (RuBisCO_small)Ribulose bisphosphate carboxylase, small chain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G, I
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
B, D, F, H, J
ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit