1IT4
Solution structure of the prokaryotic Phospholipase A2 from Streptomyces violaceoruber
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1it4a_ | All alpha proteins | Phospholipase A2, PLA2 | Phospholipase A2, PLA2 | Prokaryotic phospholipase A2 | Prokaryotic phospholipase A2 | (Streptomyces violaceoruber ) [TaxId: 1935 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phospholip_A2_3 | e1it4A1 | A: few secondary structure elements | X: Phospholipase A2, PLA2 (From Topology) | H: Phospholipase A2, PLA2 (From Topology) | T: Phospholipase A2, PLA2 | F: Phospholip_A2_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.90.10 | Mainly Alpha | Up-down Bundle | Phospholipase A2 | Phospholipase A2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09056 | Prokaryotic phospholipase A2 (Phospholip_A2_3) | Prokaryotic phospholipase A2 | The prokaryotic phospholipase A2 domain is predominantly found in bacterial and fungal phospholipases, as well as various hypothetical and putative proteins. It enables the liberation of fatty acids and lysophospholipid by hydrolysing the 2-ester bon ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036444 | Phospholipase A2 domain superfamily | Homologous Superfamily | |
IPR015141 | Phospholipase A2, prokaryotic/fungal | Family |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
phospholipase A2 (prokaryotic/fungal) M-CSA #528 | The secreted phospholipase A2 (PLA2) from Streptomyces violaceoruber is the first identified prokaryotic PLA2. This Ca II dependent, lipolytic enzyme hydrolyses the 2-acyl ester bonds of 1,2-diacylglycero-3-phospholipids. The very high catalytic activities of secreted PLA2's relative to the aggregated substrates when compared to the monomeric substrates is due to interfacial activation. | Defined by 5 residues: ASP:A-43LEU:A-44HIS:A-64ASP:A-65ASP:A-85 | EC: 3.1.1.4 (PDB Primary Data) |