1IQY
CRYSTAL STRUCTURE OF NICKEL-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1iqya1 | All beta proteins | Supersandwich | Amine oxidase catalytic domain | Amine oxidase catalytic domain | Copper amine oxidase, domain 3 | (Arthrobacter globiformis ) [TaxId: 1665 ], | SCOPe (2.08) |
A | d1iqya2 | Alpha and beta proteins (a+b) | Cystatin-like | Amine oxidase N-terminal region | Amine oxidase N-terminal region | Copper amine oxidase, domains 1 and 2 | (Arthrobacter globiformis ) [TaxId: 1665 ], | SCOPe (2.08) |
B | d1iqyb1 | All beta proteins | Supersandwich | Amine oxidase catalytic domain | Amine oxidase catalytic domain | Copper amine oxidase, domain 3 | (Arthrobacter globiformis ) [TaxId: 1665 ], | SCOPe (2.08) |
B | d1iqyb2 | Alpha and beta proteins (a+b) | Cystatin-like | Amine oxidase N-terminal region | Amine oxidase N-terminal region | Copper amine oxidase, domains 1 and 2 | (Arthrobacter globiformis ) [TaxId: 1665 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Amine oxidase N-terminal region | 8032892 | 3000455 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | amine oxidase catalytic domain | 8032891 | 3001726 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Amine oxidase N-terminal region | 8032893 | 3000455 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Amine oxidase N-terminal region | 8032893 | 3000455 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | amine oxidase catalytic domain | 8032891 | 3001726 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Amine oxidase N-terminal region | 8032892 | 3000455 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01179 | e1iqyA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF01179 | ECOD (1.6) |
A | PF02728 | e1iqyA3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: PF02728 | ECOD (1.6) |
A | PF21994 | e1iqyA2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: PF21994 | ECOD (1.6) |
B | PF01179 | e1iqyB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF01179 | ECOD (1.6) |
B | PF02728 | e1iqyB3 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: PF02728 | ECOD (1.6) |
B | PF21994 | e1iqyB2 | A: a+b two layers | X: Cystatin-like | H: Amine oxidase N-terminal region (From Topology) | T: Amine oxidase N-terminal region | F: PF21994 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.450.40 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
A | 2.70.98.20 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
B | 3.10.450.40 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
B | 2.70.98.20 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21994 | AGAO-like N2 domain (AGAO-like_N2) | AGAO-like N2 domain | This entry represents the first N-terminal domain (N2) of a group of copper amine oxidases, including PAOX from Arthrobacter globiformis (Swiss:P46881, also known as AGAO) [1-5]. | Domain | |
PF01179 | Copper amine oxidase, enzyme domain (Cu_amine_oxid) | Copper amine oxidase, enzyme domain | Copper amine oxidases are a ubiquitous and novel group of quinoenzymes that catalyse the oxidative deamination of primary amines to the corresponding aldehydes, with concomitant reduction of molecular oxygen to hydrogen peroxide. The enzymes are dime ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000269 | Copper amine oxidase | Family | |
IPR036460 | Copper amine oxidase, catalytic domain superfamily | Homologous Superfamily | |
IPR015798 | Copper amine oxidase, catalytic domain | Domain | |
IPR049947 | Copper amine oxidase, copper-binding site | Conserved Site | |
IPR016182 | Copper amine oxidase, N-terminal | Homologous Superfamily | |
IPR049948 | Copper amine oxidase, TPQ-binding site | Conserved Site |