1HEK
Crystal structure of equine infectious anaemia virus matrix antigen (EIAV MA)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1heka1 | All alpha proteins | Retroviral matrix proteins | Retroviral matrix proteins | EIAV matrix antigen | EIAV matrix antigen | EIAV (Equine infectious anemia virus ) [TaxId: 11665 ], | SCOPe (2.08) |
A | d1heka2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | EIAV (Equine infectious anemia virus ) [TaxId: 11665 ], | SCOPe (2.08) |
B | d1hekb1 | All alpha proteins | Retroviral matrix proteins | Retroviral matrix proteins | EIAV matrix antigen | EIAV matrix antigen | EIAV (Equine infectious anemia virus ) [TaxId: 11665 ], | SCOPe (2.08) |
B | d1hekb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | EIAV (Equine infectious anemia virus ) [TaxId: 11665 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | EIAV matrix antigen | 8024049 | 4002853 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Retroviral matrix proteins | 8036428 | 3000562 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Retroviral matrix proteins | 8036428 | 3000562 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Gag_p15 | e1hekA1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: Gag_p15 | ECOD (1.6) |
B | Gag_p15 | e1hekB1 | A: alpha arrays | X: Retroviral matrix proteins (From Topology) | H: Retroviral matrix proteins (From Topology) | T: Retroviral matrix proteins | F: Gag_p15 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
B | 1.10.150.90 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08723 | Gag protein p15 (Gag_p15) | Gag protein p15 | Gag p15 is a viral membrane-binding matrix protein which is alpha helical in structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
GAG POLYPROTEIN, CORE PROTEIN P15 |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045345 | Retroviral nucleocapsid Gag protein p24, C-terminal domain | Domain | |
IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily | |
IPR014834 | Gag protein p15 | Domain | |
IPR001878 | Zinc finger, CCHC-type | Domain | |
IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily | |
IPR010999 | Retroviral matrix protein | Homologous Superfamily | |
IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily | |
IPR050195 | Primate lentivirus group Gag polyprotein | Family | |
IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |