1HC1
CRYSTAL STRUCTURE OF HEXAMERIC HAEMOCYANIN FROM PANULIRUS INTERRUPTUS REFINED AT 3.2 ANGSTROMS RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1hc1a1 | All alpha proteins | Hemocyanin, N-terminal domain | Hemocyanin, N-terminal domain | Hemocyanin, N-terminal domain | Hemocyanin, N-terminal domain | California spiny lobster (Panulirus interruptus ) [TaxId: 6735 ], | SCOPe (2.08) |
A | d1hc1a2 | All alpha proteins | Di-copper centre-containing domain | Di-copper centre-containing domain | Hemocyanin middle domain | Arthropod hemocyanin | California spiny lobster (Panulirus interruptus ) [TaxId: 6735 ], | SCOPe (2.08) |
A | d1hc1a3 | All beta proteins | Immunoglobulin-like beta-sandwich | E set domains | Arthropod hemocyanin, C-terminal domain | Arthropod hemocyanin, C-terminal domain | California spiny lobster (Panulirus interruptus ) [TaxId: 6735 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | E set domains | 8054965 | 3000070 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Hemocyanin, N-terminal domain | 8025687 | 4001099 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Hemocyanin middle domain | 8025690 | 4001104 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Arthropod hemocyanin, C-terminal domain | 8054964 | 4007567 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | E set domains | 8054965 | 3000070 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | E set domains | 8054965 | 3000070 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | E set domains | 8054965 | 3000070 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | E set domains | 8054965 | 3000070 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Hemocyanin, N-terminal domain | 8038066 | 3000757 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Di-copper centre-containing domain | 8038069 | 3000773 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | E set domains | 8054965 | 3000070 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Hemocyanin_C | e1hc1C4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
C | Hemocyanin_M | e1hc1C5 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
C | Hemocyanin_N | e1hc1C3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
A | Hemocyanin_C | e1hc1A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
A | Hemocyanin_M | e1hc1A2 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
A | Hemocyanin_N | e1hc1A3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
B | Hemocyanin_C | e1hc1B4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
B | Hemocyanin_M | e1hc1B5 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
B | Hemocyanin_N | e1hc1B3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
D | Hemocyanin_C | e1hc1D4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
D | Hemocyanin_M | e1hc1D5 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
D | Hemocyanin_N | e1hc1D3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
E | Hemocyanin_C | e1hc1E4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
E | Hemocyanin_M | e1hc1E5 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
E | Hemocyanin_N | e1hc1E3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
F | Hemocyanin_C | e1hc1F4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemocyanin_C | ECOD (1.6) |
F | Hemocyanin_M | e1hc1F5 | A: alpha arrays | X: Di-copper centre-containing domain (From Topology) | H: Di-copper centre-containing domain (From Topology) | T: Di-copper centre-containing domain | F: Hemocyanin_M | ECOD (1.6) |
F | Hemocyanin_N | e1hc1F3 | A: alpha bundles | X: Hemocyanin-N (From Topology) | H: Hemocyanin-N (From Topology) | T: Hemocyanin-N | F: Hemocyanin_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00372 | Hemocyanin, copper containing domain (Hemocyanin_M) | Hemocyanin, copper containing domain | This family includes arthropod hemocyanins and insect larval storage proteins. | Domain | |
PF03722 | Hemocyanin, all-alpha domain (Hemocyanin_N) | Hemocyanin, all-alpha domain | This family includes arthropod hemocyanins and insect larval storage proteins. | Domain | |
PF03723 | Hemocyanin, ig-like domain (Hemocyanin_C) | Hemocyanin, ig-like domain | This family includes arthropod hemocyanins and insect larval storage proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
ARTHROPODAN HEMOCYANIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005204 | Hemocyanin, N-terminal | Domain | |
IPR036697 | Hemocyanin, N-terminal domain superfamily | Homologous Superfamily | |
IPR002227 | Tyrosinase copper-binding domain | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR008922 | Di-copper centre-containing domain superfamily | Homologous Superfamily | |
IPR037020 | Hemocyanin, C-terminal domain superfamily | Homologous Superfamily | |
IPR000896 | Hemocyanin/hexamerin middle domain | Domain | |
IPR013788 | Hemocyanin/hexamerin | Family | |
IPR005203 | Hemocyanin, C-terminal | Domain |