1HB7
quasi-atomic resolution model of bacteriophage PRD1 sus1 mutant, obtained by combined cryo-EM and X-ray crystallography.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
H | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
H | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
J | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
J | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
K | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
K | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
L | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2021-05-27) |
L | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF09018 | e1hb7A2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
B | PF09018 | e1hb7B2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
C | PF09018 | e1hb7C2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
D | PF09018 | e1hb7D2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
E | PF09018 | e1hb7E2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
F | PF09018 | e1hb7F2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
G | PF09018 | e1hb7G2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
H | PF09018 | e1hb7H2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
I | PF09018 | e1hb7I2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
J | PF09018 | e1hb7J2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
K | PF09018 | e1hb7K2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
L | PF09018 | e1hb7L2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
BACTERIOPHAGE PRD1 SUS1 MUTANT CAPSID | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR016112 | Group II dsDNA virus coat/capsid protein | Homologous Superfamily | |
IPR015108 | Bacteriophage PRD1, P3 | Family | |
IPR016115 | Bacteriophage PRD1, P3, N-terminal | Homologous Superfamily |