1GGX
RED FLUORESCENT PROTEIN (FP583 OR DSRED(CLONTECH)) FROM DISCOSOMA SP.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1ggxb_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | Red fluorescent protein (fp583 or dsred(clontech)) | (Discosoma sp. ) [TaxId: 86600 ], | SCOPe (2.08) |
C | d1ggxc_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | Red fluorescent protein (fp583 or dsred(clontech)) | (Discosoma sp. ) [TaxId: 86600 ], | SCOPe (2.08) |
D | d1ggxd_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | Red fluorescent protein (fp583 or dsred(clontech)) | (Discosoma sp. ) [TaxId: 86600 ], | SCOPe (2.08) |
A | d1ggxa_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | Red fluorescent protein (fp583 or dsred(clontech)) | (Discosoma sp. ) [TaxId: 86600 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | GFP-like | 8034842 | 3000576 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GFP-like | 8034842 | 3000576 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GFP-like | 8034842 | 3000576 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Fluorescent proteins | 8022462 | 4001049 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GFP-like | 8034842 | 3000576 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | GFP | e1ggxB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
C | GFP | e1ggxC1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
D | GFP | e1ggxD1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
A | GFP | e1ggxA1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: GFP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
C | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
D | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PROTEIN (FLUORESCENT PROTEIN FP583) | - | - |