CRYSTAL STRUCTURE ANALYSIS OF N-CARBAMoYL-D-AMINO-ACID AMIDOHYDROLASE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1fo6a_ | Alpha and beta proteins (a+b) | Carbon-nitrogen hydrolase | Carbon-nitrogen hydrolase | Carbamilase | N-carbamoyl-D-aminoacid amidohydrolase | (Agrobacterium tumefaciens ) [TaxId: 358 ], | SCOPe (2.08) |
| B | d1fo6b_ | Alpha and beta proteins (a+b) | Carbon-nitrogen hydrolase | Carbon-nitrogen hydrolase | Carbamilase | N-carbamoyl-D-aminoacid amidohydrolase | (Agrobacterium tumefaciens ) [TaxId: 358 ], | SCOPe (2.08) |
| D | d1fo6d_ | Alpha and beta proteins (a+b) | Carbon-nitrogen hydrolase | Carbon-nitrogen hydrolase | Carbamilase | N-carbamoyl-D-aminoacid amidohydrolase | (Agrobacterium tumefaciens ) [TaxId: 358 ], | SCOPe (2.08) |
| C | d1fo6c_ | Alpha and beta proteins (a+b) | Carbon-nitrogen hydrolase | Carbon-nitrogen hydrolase | Carbamilase | N-carbamoyl-D-aminoacid amidohydrolase | (Agrobacterium tumefaciens ) [TaxId: 358 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Carbon-nitrogen hydrolases-like | 8020755 | 4002312 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Carbon-nitrogen hydrolases | 8033135 | 3001086 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Carbon-nitrogen hydrolases | 8033135 | 3001086 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Carbon-nitrogen hydrolases | 8033135 | 3001086 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Carbon-nitrogen hydrolases | 8033135 | 3001086 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Metallophos,PPP5 | e1fo6A1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Metallophos,PPP5 | ECOD (v294.1) |
| B | Metallophos,PPP5 | e1fo6B1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Metallophos,PPP5 | ECOD (v294.1) |
| D | Metallophos,PPP5 | e1fo6D1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Metallophos,PPP5 | ECOD (v294.1) |
| C | Metallophos,PPP5 | e1fo6C1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Metallophos,PPP5 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.60.110.10 | Alpha Beta | 4-Layer Sandwich | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase | Carbon-nitrogen hydrolase | CATH (4.3.0) |
| B | 3.60.110.10 | Alpha Beta | 4-Layer Sandwich | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase | Carbon-nitrogen hydrolase | CATH (4.3.0) |
| D | 3.60.110.10 | Alpha Beta | 4-Layer Sandwich | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase | Carbon-nitrogen hydrolase | CATH (4.3.0) |
| C | 3.60.110.10 | Alpha Beta | 4-Layer Sandwich | Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase | Carbon-nitrogen hydrolase | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| N-CARBAMoYL-D-AMINO-ACID AMIDOHYDROLASE | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
| Chains | Enzyme Name | Description | Catalytic Residues |
|---|---|---|---|
| N-carbamoyl-D-amino-acid hydrolase M-CSA #671 | N-carbomyl-D-amino-acid amidohydrolase catalyses the hydrolysis of N-carbamoyl-D-amino acids to the corresponding D-amino acids which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme. | Defined by 6 residues: GLU:A-47ASN:A-110LYS:A-127GLU:A-146CYS:A-172ASN:A-197 | EC: 3.4.22.12 (PDB Primary Data) EC: 3.5.1.77 (UniProt) |
