1F5N
HUMAN GUANYLATE BINDING PROTEIN-1 IN COMPLEX WITH THE GTP ANALOGUE, GMPPNP.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1f5na1 | All alpha proteins | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1f5na2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | G proteins | Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | GBP-like | 8019667 | 4004045 | SCOP2 (2022-06-29) |
A | SCOP2 Family | GBP helical domain-like | 8058310 | 4001242 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ras-like P-loop GTPases | 8019668 | 3002022 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GBP helical domain-like | 8019671 | 3001145 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GBP helical domain-like | 8019672 | 3001145 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GBP_C | e1f5nA1 | A: alpha bundles | X: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | H: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain (From Topology) | T: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | F: GBP_C | ECOD (1.6) |
A | GBP | e1f5nA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: GBP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1000.10 | Mainly Alpha | Up-down Bundle | Signaling Protein - Interferon-induced Guanylate-binding Protein 1 | Chain A, domain 1 | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02263 | Guanylate-binding protein, N-terminal domain (GBP) | Guanylate-binding protein, N-terminal domain | Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP. | Domain | |
PF02841 | Guanylate-binding protein, C-terminal domain (GBP_C) | Guanylate-binding protein, C-terminal domain | Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036543 | Guanylate-binding protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR015894 | Guanylate-binding protein, N-terminal | Domain | |
IPR003191 | Guanylate-binding protein/Atlastin, C-terminal | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR030386 | GB1/RHD3-type guanine nucleotide-binding (G) domain | Domain | |
IPR037684 | Guanylate-binding protein, C-terminal | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target | Associated Disease |
---|---|---|
P32455 | :