1DTO
CRYSTAL STRUCTURE OF THE COMPLETE TRANSACTIVATION DOMAIN OF E2 PROTEIN FROM THE HUMAN PAPILLOMAVIRUS TYPE 16
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dtoa1 | All beta proteins | E2 regulatory, transactivation domain | E2 regulatory, transactivation domain | E2 regulatory, transactivation domain | E2 regulatory, transactivation domain | (Human papillomavirus 16 ) [TaxId: 333760 ], | SCOPe (2.08) |
A | d1dtoa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Human papillomavirus 16 ) [TaxId: 333760 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PPV_E2_N_C | e1dtoA1 | A: beta sandwiches | X: E2 regulatory, transactivation domain (From Topology) | H: E2 regulatory, transactivation domain (From Topology) | T: E2 regulatory, transactivation domain | F: PPV_E2_N_C | ECOD (1.6) |
A | PPV_E2_N_N | e1dtoA2 | A: alpha bundles | X: Alpha-helical subdomain in E2 regularoty transactivation domain (From Topology) | H: Alpha-helical subdomain in E2 regularoty transactivation domain (From Topology) | T: Alpha-helical subdomain in E2 regularoty transactivation domain | F: PPV_E2_N_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.30 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | E2 (early) protein, N terminal domain, subdomain 1 | CATH (4.3.0) |
A | 2.170.200.10 | Mainly Beta | Beta Complex | Regulatory Protein E2 | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00508 | E2 (early) protein, N terminal (PPV_E2_N) | E2 (early) protein, N terminal | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033668 | Regulatory protein E2 | Family | |
IPR042503 | E2 regulatory, transactivation domain, subdomain 1 | Homologous Superfamily | |
IPR001866 | Papillomavirus E2, N-terminal | Domain | |
IPR036050 | E2 regulatory, transactivation domain | Homologous Superfamily | |
IPR042504 | E2 regulatory, transactivation domain, subdomain 2 | Homologous Superfamily | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR000427 | Papillomavirus E2, C-terminal | Domain | |
IPR035975 | E2/EBNA1, C-terminal | Homologous Superfamily |