1D2O
CRYSTAL STRUCTURE OF A SINGLE B REPEAT UNIT (B1) OF COLLAGEN BINDING SURFACE PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1d2oa1 | All beta proteins | Prealbumin-like | Cna protein B-type domain | Cna protein B-type domain | B repeat unit of collagen binding surface protein (cna) | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
B | d1d2ob1 | All beta proteins | Prealbumin-like | Cna protein B-type domain | Cna protein B-type domain | B repeat unit of collagen binding surface protein (cna) | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Cna B-type domain-like | 8027983 | 4002132 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Cna B-type domain-like | 8027985 | 4002132 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cna B-type domain-like | 8040362 | 3000862 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cna B-type domain-like | 8040364 | 3000862 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Cna B-type domain-like | 8040362 | 3000862 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cna B-type domain-like | 8040364 | 3000862 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cna_B | e1d2oA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: Cna_B | ECOD (1.6) |
B | Cna_B | e1d2oB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: Cna_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1140 | Mainly Beta | Sandwich | Immunoglobulin-like | Collagen-binding surface protein Cna, B-type domain | CATH (4.3.0) |
B | 2.60.40.1140 | Mainly Beta | Sandwich | Immunoglobulin-like | Collagen-binding surface protein Cna, B-type domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05738 | Cna protein B-type domain (Cna_B) | Cna protein B-type domain | This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved [1] and forms a beta sandwich structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
COLLAGEN ADHESIN |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR008456 | Collagen binding domain | Domain | |
IPR041033 | Prealbumin-like fold domain | Domain | |
IPR008454 | Collagen-binding surface protein Cna-like, B-type domain | Domain | |
IPR008966 | Adhesion domain superfamily | Homologous Superfamily | |
IPR011252 | Fibrogen-binding domain 1 | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |