1CJS
CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L1 FROM METHANOCOCCUS JANNASCHII
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1cjsa_ | Multi-domain proteins (alpha and beta) | Ribosomal protein L1 | Ribosomal protein L1 | Ribosomal protein L1 | Ribosomal protein L1 | (Methanocaldococcus jannaschii ) [TaxId: 2190 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00687 | e1cjsA1 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
A | PF00687 | e1cjsA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.190.20 | Alpha Beta | 2-Layer Sandwich | Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase | Ribosomal protein L1/L10, rRNA-binding domain | CATH (4.3.0) |
A | 3.40.50.790 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Ribosomal protein L1/L10, domain II | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023673 | Large ribosomal subunit protein uL1, conserved site | Conserved Site | |
IPR023669 | Large ribosomal subunit protein uL1, archaea | Family | |
IPR016095 | Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain | Homologous Superfamily | |
IPR023674 | Ribosomal protein uL1-like | Homologous Superfamily | |
IPR002143 | Large ribosomal subunit protein uL1 | Family | |
IPR028364 | Ribosomal protein uL1/ribosomal biogenesis protein | Family |