1C8G
FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1c8ga_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | ssDNA viruses | Parvoviridae-like VP | Parvovirus (panleukopenia virus) capsid protein | (Feline panleukopenia virus ) [TaxId: 10786 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Parvo_coat | e1c8gA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Parvo_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.30.10 | Mainly Beta | Beta Complex | Empty Capsid Viral Protein 2 | Parvovirus coat protein VP1/VP2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00740 | Parvovirus coat protein VP2 (Parvo_coat) | Parvovirus coat protein VP2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013607 | Phospholipase A2-like domain | Domain | |
IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily | |
IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily | |
IPR001403 | Parvovirus coat protein VP2 | Domain |