1C28
THE CRYSTAL STRUCTURE OF A COMPLMENT-1Q FAMILY PROTEIN SUGGESTS AN EVOLUTIONARY LINK TO TUMOR NECROSIS FACTOR
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1c28a_ | All beta proteins | TNF-like | TNF-like | TNF-like | 30 kDa adipocyte complement-related protein | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d1c28b_ | All beta proteins | TNF-like | TNF-like | TNF-like | 30 kDa adipocyte complement-related protein | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
C | d1c28c_ | All beta proteins | TNF-like | TNF-like | TNF-like | 30 kDa adipocyte complement-related protein | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00386 | e1c28A1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00386 | ECOD (1.6) |
B | PF00386 | e1c28B1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00386 | ECOD (1.6) |
C | PF00386 | e1c28C1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00386 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00386 | C1q domain (C1q) | C1q domain | C1q is a subunit of the C1 enzyme complex that activates the serum complement system. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008983 | Tumour necrosis factor-like domain superfamily | Homologous Superfamily | |
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR050392 | Collagen/C1q domain-containing | Family | |
IPR001073 | C1q domain | Domain |