13CM | pdb_000013cm

HAdV-C5 Hexon with coagulation factor II


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyGroup II dsDNA viruses VP 8038150 3001214 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroup II dsDNA viruses VP 8038153 3001214 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup II dsDNA viruses VP 8038150 3001214 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup II dsDNA viruses VP 8038153 3001214 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroup II dsDNA viruses VP 8038150 3001214 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroup II dsDNA viruses VP 8038153 3001214 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth G]PF00594Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain (Gla)Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domainThis domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla). Domain
A, B, C
PF01065Hexon, adenovirus major coat protein, N-terminal domain (Adeno_hexon)Hexon, adenovirus major coat protein, N-terminal domainHexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polype ...Hexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polypeptide IX. The penton complex, formed by the peripentonal hexons and base hexon (holding in place a fibre), lie at each of the 12 vertices [1]. The N and C-terminal domains adopt the same PNGase F-like fold although they are significantly different in length.
Domain
A, B, C
PF03678Hexon, adenovirus major coat protein, C-terminal domain (Adeno_hexon_C)Hexon, adenovirus major coat protein, C-terminal domainHexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polypep ...Hexon is the major coat protein from adenovirus type 2. Hexon forms a homo-trimer. The 240 copies of the hexon trimer are organised so that 12 lie on each of the 20 facets. The central 9 hexons in a facet are cemented together by 12 copies of polypeptide IX. The penton complex, formed by the peripentonal hexons and base hexon (holding in place a fibre), lie at each of the 12 vertices [1]. The N and C-terminal domains adopt the same PNGase F-like fold although they are significantly different in length.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth G]Prothrombin
A, B, C
Hexon protein

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D [auth G]CGU Parent Component: GLU

AA0032

:  L-gamma-carboxyglutamic acid MOD:00041