6M2V
Crystal structure of UHRF1 SRA complexed with fully-mCHG DNA.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth B] | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2B Superfamily | PUA domain-like | 8038600 | 3001015 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth B] | SAD_SRA | e6m2vB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
D [auth A] | SAD_SRA | e6m2vA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: SAD_SRA | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth B], D [auth A] | PF02182 | SAD/SRA domain (SAD_SRA) | SAD/SRA domain | The domain goes by several names including SAD [1], SRA [2] and YDG [3]. It adopts a beta barrel, modified PUA-like, fold that is widely present in eukaryotic chromatin proteins and in bacteria [4]. Versions of this domain are known to bind hemi-m ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth B], D [auth A] | IPR015947 | PUA-like superfamily | Homologous Superfamily |
C [auth B], D [auth A] | IPR001965 | Zinc finger, PHD-type | Domain |
C [auth B], D [auth A] | IPR003105 | SRA-YDG | Domain |
C [auth B], D [auth A] | IPR019787 | Zinc finger, PHD-finger | Domain |
C [auth B], D [auth A] | IPR047406 | E3 ubiquitin-protein ligase UHRF1, ubiquitin-like domain | Domain |
C [auth B], D [auth A] | IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily |
C [auth B], D [auth A] | IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site |
C [auth B], D [auth A] | IPR000626 | Ubiquitin-like domain | Domain |
C [auth B], D [auth A] | IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
C [auth B], D [auth A] | IPR021991 | UHRF1, tandem tudor domain | Domain |
C [auth B], D [auth A] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
C [auth B], D [auth A] | IPR045134 | UHRF1/2-like | Family |
C [auth B], D [auth A] | IPR001841 | Zinc finger, RING-type | Domain |
C [auth B], D [auth A] | IPR036987 | SRA-YDG superfamily | Homologous Superfamily |