5MHL
FXIIIa in complex with the inhibitor Mi0621
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cysteine proteinases | 8055403 | 3001808 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055474 | 3002048 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | E set domains | 8055027 | 3000070 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055219 | 3002048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055474 | 3002048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | E set domains | 8055027 | 3000070 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055219 | 3002048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cysteine proteinases | 8055403 | 3001808 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Transglut_N | e5mhlA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_N | ECOD (1.6) |
A | Transglut_C_1 | e5mhlA4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C_1 | ECOD (1.6) |
A | Transglut_C | e5mhlA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C | ECOD (1.6) |
A | Transglut_core | e5mhlA3 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: Transglut_core | ECOD (1.6) |
B | Transglut_N | e5mhlB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_N | ECOD (1.6) |
B | Transglut_C_1 | e5mhlB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C_1 | ECOD (1.6) |
B | Transglut_C | e5mhlB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C | ECOD (1.6) |
B | Transglut_core | e5mhlB4 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: Transglut_core | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.90.260.10 | Alpha Beta | Alpha-Beta Complex | Coagulation Factor XIII | Chain A, domain 2 | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 3.90.260.10 | Alpha Beta | Alpha-Beta Complex | Coagulation Factor XIII | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00868 | Transglutaminase family (Transglut_N) | Transglutaminase family | - | Domain | |
PF00927 | Transglutaminase family, C-terminal ig like domain (Transglut_C) | Transglutaminase family, C-terminal ig like domain | - | Domain | |
PF01841 | Transglutaminase-like superfamily (Transglut_core) | Transglutaminase-like superfamily | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036985 | Transglutaminase-like superfamily | Homologous Superfamily | |
IPR036238 | Transglutaminase, C-terminal domain superfamily | Homologous Superfamily | |
IPR013808 | Transglutaminase, active site | Active Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR002931 | Transglutaminase-like | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
IPR001102 | Transglutaminase, N-terminal | Domain | |
IPR008958 | Transglutaminase, C-terminal | Domain | |
IPR050779 | Protein-glutamine gamma-glutamyltransferases | Family | |
IPR023608 | Protein-glutamine gamma-glutamyltransferase, animal | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
C [auth K], D [auth O] | 7NX | |
C [auth K], D [auth O] | NH2 | AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | : 
C [auth K], D [auth O] | ONL | AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 | :