4J4F
Structure of P51G Cyanovirin-N swapped tetramer in the P212121 space group
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | d4j4fd_ | All beta proteins | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | (Nostoc ellipsosporum ) [TaxId: 45916 ], | SCOPe (2.08) |
B [auth C] | d4j4fc_ | All beta proteins | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | (Nostoc ellipsosporum ) [TaxId: 45916 ], | SCOPe (2.08) |
C [auth B] | d4j4fb_ | All beta proteins | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | (Nostoc ellipsosporum ) [TaxId: 45916 ], | SCOPe (2.08) |
D [auth A] | d4j4fa_ | All beta proteins | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | Cyanovirin-N | (Nostoc ellipsosporum ) [TaxId: 45916 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | Cyanovirin-N | 8043158 | 3002001 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Cyanovirin-N | 8043158 | 3002001 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Cyanovirin-N | 8043158 | 3002001 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2B Superfamily | Cyanovirin-N | 8043158 | 3002001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | CVNH | e4j4fD1 | A: beta duplicates or obligate multimers | X: Cyanovirin-N (From Topology) | H: Cyanovirin-N (From Topology) | T: Cyanovirin-N | F: CVNH | ECOD (1.6) |
B [auth C] | CVNH | e4j4fC1 | A: beta duplicates or obligate multimers | X: Cyanovirin-N (From Topology) | H: Cyanovirin-N (From Topology) | T: Cyanovirin-N | F: CVNH | ECOD (1.6) |
C [auth B] | CVNH | e4j4fB1 | A: beta duplicates or obligate multimers | X: Cyanovirin-N (From Topology) | H: Cyanovirin-N (From Topology) | T: Cyanovirin-N | F: CVNH | ECOD (1.6) |
D [auth A] | CVNH | e4j4fA1 | A: beta duplicates or obligate multimers | X: Cyanovirin-N (From Topology) | H: Cyanovirin-N (From Topology) | T: Cyanovirin-N | F: CVNH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D [auth A] | 2.30.60.10 | Mainly Beta | Roll | HIV-inactivating Protein, Cyanovirin-n | Cyanovirin-N | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth C], C [auth B], D [auth A] | PF08881 | CVNH domain (CVNH) | CVNH domain | CyanoVirin-N Homology domains are found in the sugar-binding antiviral protein cyanovirin-N (CVN) as well as filamentous ascomycetes and in the fern Ceratopteris richardii. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D], B [auth C], C [auth B], D [auth A] | IPR036673 | Cyanovirin-N superfamily | Homologous Superfamily |
A [auth D], B [auth C], C [auth B], D [auth A] | IPR011058 | Cyanovirin-N | Domain |