2GFQ
Structure of Protein of Unknown Function PH0006 from Pyrococcus horikoshii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | AF0625-like | 8041844 | 3000245 | SCOP2B (2022-06-29) |
A | SCOP2 Family | AF0625-like | 8029465 | 4003095 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | AF0625-like | 8041844 | 3000245 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | AF0625-like | 8041844 | 3000245 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | tRNA_deacylase_N | e2gfqC1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: tRNA_deacylase_N | ECOD (1.6) |
A | tRNA_deacylase_N | e2gfqA1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: tRNA_deacylase_N | ECOD (1.6) |
A | tRNA_deacylase_C | e2gfqA2 | A: a/b three-layered sandwiches | X: a/b domain in AF0625-like proteins (From Topology) | H: a/b domain in AF0625-like proteins (From Topology) | T: a/b domain in AF0625-like proteins | F: tRNA_deacylase_C | ECOD (1.6) |
B | tRNA_deacylase_N | e2gfqB1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: tRNA_deacylase_N | ECOD (1.6) |
B | tRNA_deacylase_C | e2gfqB2 | A: a/b three-layered sandwiches | X: a/b domain in AF0625-like proteins (From Topology) | H: a/b domain in AF0625-like proteins (From Topology) | T: a/b domain in AF0625-like proteins | F: tRNA_deacylase_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.40.630.50 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | AF0625-like | CATH (4.3.0) |
C | 3.40.50.10700 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | AF0625-like | CATH (4.3.0) |
A | 3.40.630.50 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | AF0625-like | CATH (4.3.0) |
A | 3.40.50.10700 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | AF0625-like | CATH (4.3.0) |
B | 3.40.630.50 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | AF0625-like | CATH (4.3.0) |
B | 3.40.50.10700 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | AF0625-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04414 | D-aminoacyl-tRNA deacylase (tRNA_deacylase) | D-aminoacyl-tRNA deacylase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007508 | D-aminoacyl-tRNA deacylase DtdA | Family | |
IPR018033 | D-aminoacyl-tRNA deacylase, archaea | Family |