1M72
Crystal Structure of Caspase-1 from Spodoptera frugiperda
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1m72a_ | Alpha and beta proteins (a/b) | Caspase-like | Caspase-like | Caspase catalytic domain | Caspase-1 | fall armyworm (Spodoptera frugiperda ) [TaxId: 7108 ], | SCOPe (2.08) |
C [auth B] | d1m72b_ | Alpha and beta proteins (a/b) | Caspase-like | Caspase-like | Caspase catalytic domain | Caspase-1 | fall armyworm (Spodoptera frugiperda ) [TaxId: 7108 ], | SCOPe (2.08) |
E [auth C] | d1m72c1 | Alpha and beta proteins (a/b) | Caspase-like | Caspase-like | Caspase catalytic domain | Caspase-1 | fall armyworm (Spodoptera frugiperda ) [TaxId: 7108 ], | SCOPe (2.08) |
E [auth C] | d1m72c2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | fall armyworm (Spodoptera frugiperda ) [TaxId: 7108 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Caspase-like | 8036327 | 3001096 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2 Family | Caspase catalytic domain | 8023948 | 4003593 | SCOP2 (2022-06-29) |
C [auth B] | SCOP2 Superfamily | Caspase-like | 8036327 | 3001096 | SCOP2 (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Caspase-like | 8036327 | 3001096 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_C14 | e1m72A1 | A: a/b three-layered sandwiches | X: Caspase-like (From Topology) | H: Caspase-like (From Topology) | T: Caspase-like | F: Peptidase_C14 | ECOD (1.6) |
C [auth B] | Peptidase_C14 | e1m72B1 | A: a/b three-layered sandwiches | X: Caspase-like (From Topology) | H: Caspase-like (From Topology) | T: Caspase-like | F: Peptidase_C14 | ECOD (1.6) |
E [auth C] | Peptidase_C14 | e1m72C1 | A: a/b three-layered sandwiches | X: Caspase-like (From Topology) | H: Caspase-like (From Topology) | T: Caspase-like | F: Peptidase_C14 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1460 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C [auth B] | 3.40.50.1460 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
E [auth C] | 3.40.50.1460 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C] | PF00656 | Caspase domain (Peptidase_C14) | Caspase domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
B [auth D], D [auth E], F | 0QE | |
B [auth D], D [auth E], F | ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | :