- FASTA Sequence
- PDBx/mmCIF Format
- PDBx/mmCIF Format (gz)
- BinaryCIF Format (gz)
- PDB Format
- PDB Format (gz)
- PDBML/XML Format (gz)
- Structure Factors (CIF)
- Structure Factors (CIF - gz)
- Validation Full PDF
- Validation (XML - gz)
- Validation (CIF - gz)
- Validation 2fo-fc coefficients (CIF - gz)
- Validation fo-fc coefficients (CIF - gz)
- Biological Assembly 1 (CIF - gz)
- Biological Assembly 1 (PDB - gz)
6PS7
XFEL A2aR structure by ligand exchange from LUF5843 to ZM241385.
NOTE: Use your mouse to access Jsmol features and to drag, rotate, and zoom in and out of the structure.Help

Jmol._Canvas2D (Jmol) "jmolApplet0"[x]
loadScript /js/jsmol/j2s/core/package.js
loadScript /js/jsmol/j2s/core/corejmol.z.js
loadScript /js/jsmol/j2s/J/translation/PO.js
loadScript /js/jsmol/j2s/core/corescript.z.js
JSmol exec jmolApplet0 start applet null
Jmol JavaScript applet jmolApplet0__081260284819423__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript true
AppletRegistry.checkIn(jmolApplet0__081260284819423__)
vwrOptions:
{ "name":"jmolApplet0","applet":true,"documentBase":"https://www.rcsb.org/3d-view/jsmol/6PS7","platform":"J.awtjs2d.Platform","allowjavascript":true,"fullName":"jmolApplet0__081260284819423__","codePath":"https:/js/jsmol/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"081260284819423","bgcolor":"#FFFFFF" }
setting document base to "https://www.rcsb.org/3d-view/jsmol/6PS7"
(C) 2015 Jmol Development
Jmol Version: 14.31.4 2020-09-06 18:16
java.vendor: Java2Script (HTML5)
java.version: 2019-06-08 00:17:46 (JSmol/j2s)
os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0 (signed)
Jmol getValue emulate null
defaults = "Jmol"
Jmol getValue boxbgcolor null
Jmol getValue bgcolor #FFFFFF
backgroundColor = "#FFFFFF"
Jmol getValue ANIMFRAMECallback null
Jmol getValue APPLETREADYCallback Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
StatusManager callback set for APPLETREADYCallback f=Jmol._readyCallback cb=APPLETREADY
Jmol getValue ATOMMOVEDCallback null
Jmol getValue AUDIOCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue SERVICECallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SYNCCallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue doTranslate null
language=en_US
Jmol getValue popupMenu null
Jmol getValue script null
Jmol getValue loadInline null
Jmol getValue load null
Jmol applet jmolApplet0__081260284819423__ ready
script 1 started
antialiasDisplay = true
loadScript /js/jsmol/j2s/core/corescriptcmd.z.js
FileManager.getAtomSetCollectionFromFile(https://files.rcsb.org/download/6ps7.cif)
FileManager opening url https://files.rcsb.org/download/6ps7.cif
The Resolver thinks MMCif
loadScript /js/jsmol/j2s/J/adapter/readers/cif/MMCifReader.js
loadScript /js/jsmol/j2s/J/adapter/readers/cif/CifReader.js
loadScript /js/jsmol/j2s/JU/CifDataParser.js
loadScript /js/jsmol/j2s/core/corebio.z.js
filtering with ;BIOMOLECULE 1;
TITLE: Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
CLR = CHOLESTEROL
HOH = WATER
NA = SODIUM ION
OLA = OLEIC ACID
OLB = (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
OLC = (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
ZMA = 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol
Setting space group name to HM:C 2 2 21
biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA
6PS7
3 bonds added
loadScript /js/jsmol/j2s/core/coresym.z.js
loadScript /js/jsmol/j2s/JU/Tensor.js
loadScript /js/jsmol/j2s/JU/Eigen.js
loadScript /js/jsmol/j2s/javajs/api/EigenInterface.js
loadScript /js/jsmol/j2s/JU/EigenSort.js
Time for openFile(https://files.rcsb.org/download/6ps7.cif): 5078 ms
reading 3655 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
model 1.1 alternative locations: AB
Default Van der Waals type for model set to Jmol
3655 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Time for creating model: 108 ms
TITLE: Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
CLR = CHOLESTEROL
HOH = WATER
NA = SODIUM ION
OLA = OLEIC ACID
OLB = (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
OLC = (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
ZMA = 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol
found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA
6PS7
3 bonds added
loadScript /js/jsmol/j2s/core/corescriptmath.z.js
loadScript /js/jsmol/j2s/J/bspt/PointIterator.js
Script completed
Jmol script terminated
script 2 started
0 atoms hidden
3655 atoms selected
419 atoms selected
0 atoms selected
0 atoms selected
0 atoms selected
3655 atoms selected
Script completed
Jmol script terminated
script 3 started
0 atoms hidden
3655 atoms selected
defaultColorScheme = "jmol"
419 atoms selected
3655 atoms selected
Script completed
Jmol script terminated
script 4 started
Script completed
Jmol script terminated
loadScript /js/jsmol/j2s/J/g3d/HermiteRenderer.js
Scripting Options
Structure Details
Select Options
Surface options may take a long time to render, especially for larger structures
Select a different viewer
Help Links
Jmol, an open source Java viewer for chemical structures in 3D (http://www.jmol.org)