5ZEW

A ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum

PDB DOI: https://doi.org/10.2210/pdb5ZEW/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Candidatus Caldarchaeum subterraneum
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-02-28 Released: 2019-02-27
Deposition Author(s): Mi, J., Ye, K.Q.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The hydrophobic effect and electrostatic interactions contribute to the thermostability of the ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum

Mi, J., Ye, K.Q., Ni, J., Zhang, J.H., Liao, S.H., Tu, X.M.

To be published.

Macromolecule Content

Total Structure Weight: 8.11 kDa
Atom Count: 566
Modelled Residue Count: 77
Deposited Residue Count: 77
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin-like protein	A	77	Candidatus Caldarchaeum subterraneum	Mutation(s): 0 Gene Names: CSUB_C1474, HGMM_F04B03C03, HGMM_F21D07C21, HGMM_F30C12C33
UniProt
Find proteins for E6N8B8 (Caldiarchaeum subterraneum) Explore E6N8B8 Go to UniProtKB: E6N8B8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	E6N8B8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2019-02-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2019-02-27
Type: Initial release
Version 1.1: 2024-05-01
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.