5VMK

Crystal structure of a bifunctional GlmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1- phosphate N-acetyltransferase from Acinetobacter baumannii

PDB DOI: https://doi.org/10.2210/pdb5VMK/pdb

Classification: TRANSFERASE
Organism(s): Acinetobacter baumannii
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2017-04-27 Released: 2017-05-24
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å
R-Value Free: 0.248
R-Value Work: 0.185
R-Value Observed: 0.187

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of a bifunctional GlmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1- phosphate N-acetyltransferase from Acinetobacter baumannii

Edwards, T.E., Abendroth, J., Lorimer, D.D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published.

Macromolecule Content

Total Structure Weight: 151.11 kDa
Atom Count: 9,670
Modelled Residue Count: 1,294
Deposited Residue Count: 1,386
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bifunctional protein GlmU	A, B, C	462	Acinetobacter baumannii	Mutation(s): 0 Gene Names: glmU, ABUW_0090 EC: 2.3.1.157 (PDB Primary Data), 2.7.7.23 (PDB Primary Data)
UniProt
Find proteins for B0VPT6 (Acinetobacter baumannii (strain SDF)) Explore B0VPT6 Go to UniProtKB: B0VPT6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	B0VPT6
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PG4 Query on PG4 Download Ideal Coordinates CCD File SDF format, chain G [auth B] SDF format, chain H [auth C] SDF format, chain J [auth C] MOL2 format, chain G [auth B] MOL2 format, chain H [auth C] MOL2 format, chain J [auth C] mmCIF format, chain G [auth B] mmCIF format, chain H [auth C] mmCIF format, chain J [auth C]	G [auth B], H [auth C], J [auth C]	TETRAETHYLENE GLYCOL C₈ H₁₈ O₅ UWHCKJMYHZGTIT-UHFFFAOYSA-N		Interactions Focus chain G [auth B] Focus chain H [auth C] Focus chain J [auth C] Interactions & Density Focus chain G [auth B] Focus chain H [auth C] Focus chain J [auth C]
CIT Query on CIT Download Ideal Coordinates CCD File SDF format, chain D [auth A] SDF format, chain F [auth B] SDF format, chain I [auth C] MOL2 format, chain D [auth A] MOL2 format, chain F [auth B] MOL2 format, chain I [auth C] mmCIF format, chain D [auth A] mmCIF format, chain F [auth B] mmCIF format, chain I [auth C]	D [auth A], F [auth B], I [auth C]	CITRIC ACID C₆ H₈ O₇ KRKNYBCHXYNGOX-UHFFFAOYSA-N		Interactions Focus chain D [auth A] Focus chain F [auth B] Focus chain I [auth C] Interactions & Density Focus chain D [auth A] Focus chain F [auth B] Focus chain I [auth C]
PO4 Query on PO4 Download Ideal Coordinates CCD File SDF format, chain E [auth A] MOL2 format, chain E [auth A] mmCIF format, chain E [auth A]	E [auth A]	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Interactions Focus chain E [auth A] Interactions & Density Focus chain E [auth A]