Download MendeleyStructural Features of Archaeal Beta-Phosphoglucomutase from Hyper-Thermophilic Pyrococcus Sp. Strain St 04
Park, K.-H., Jung, J.-H., Park, C.-S., Woo, E.-J.To be published.
4UW9
The crystal structural of archaeal beta-phosphoglucomutase from hyper-thermophilic Pyrococcus sp. Strain ST 04
- PDB DOI: https://doi.org/10.2210/pdb4UW9/pdb
- Classification: ISOMERASE
- Organism(s): Pyrococcus sp. ST04
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2014-08-09 Released: 2014-10-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.238
- R-Value Work: 0.184
- R-Value Observed: 0.190
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| BETA-PHOSPHOGLUCOMUTASE | 229 | Pyrococcus sp. ST04 | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for I3RFR5 (Pyrococcus sp. ST04) Explore I3RFR5 Go to UniProtKB: I3RFR5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | I3RFR5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.238
- R-Value Work: 0.184
- R-Value Observed: 0.190
- Space Group: I 41
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 94.628 | α = 90 |
| b = 94.628 | β = 90 |
| c = 83.124 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
Entry History
Deposition Data
- Released Date: 2014-10-29 Deposition Author(s): Park, K.-H., Woo, E.-J.
Revision History (Full details and data files)
- Version 1.0: 2014-10-29
Type: Initial release - Version 1.1: 2015-09-23
Changes: Data collection - Version 1.2: 2024-11-13
Changes: Data collection, Database references, Derived calculations, Other, Structure summary
