2QGG

X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.

• PDB DOI: https://doi.org/10.2210/pdb2QGG/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Acinetobacter calcoaceticus
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2007-06-28 Released: 2007-07-17 
• Deposition Author(s): Kuzin, A.P., Su, M., Jayaraman, S., Wang, D., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free: 0.256 
• R-Value Work: 0.207 
• R-Value Observed: 0.207 

Literature

X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248.

Kuzin, A.P., Su, M., Jayaraman, S., Wang, D., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 21.08 kDa 
• Atom Count: 1,477 
• Modelled Residue Count: 176 
• Deposited Residue Count: 182 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
16S rRNA-processing protein rimM	A	182	Acinetobacter calcoaceticus	Mutation(s): 5  Gene Names: rimM, ACIAD3312
UniProt
Find proteins for Q6F7I0 (Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)) Explore Q6F7I0  Go to UniProtKB:  Q6F7I0

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
K	B [auth A]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N
UNL	C [auth A]	Unknown ligand NPYPAHLBTDXSSS-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free: 0.256 
• R-Value Work: 0.207 
• R-Value Observed: 0.207 
• Space Group: P 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 44.899	α = 90
b = 37.588	β = 97.23
c = 69.2	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
ADSC	data collection
DENZO	data reduction
SCALEPACK	data scaling
SOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-07-17 
Deposition Author(s): Kuzin, A.P., Su, M., Jayaraman, S., Wang, D., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2007-07-17
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2018-01-24
  Changes: Database references, Structure summary
• Version 1.4: 2024-11-13
  Changes: Data collection, Database references, Derived calculations, Structure summary