The Crystal Structure of USP8 from Biortus.
Wang, F., Cheng, W., Yuan, Z., Lin, D., Wang, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ubiquitin carboxyl-terminal hydrolase 8 | 377 | Homo sapiens | Mutation(s): 0  Gene Names: USP8, KIAA0055, UBPY EC: 3.4.19.12 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P40818 (Homo sapiens) Explore P40818  Go to UniProtKB:  P40818 | |||||
PHAROS:  P40818 GTEx:  ENSG00000138592  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P40818 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | H [auth C] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
ZN Query on ZN | D [auth A], G [auth B], I [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
EDO Query on EDO | E [auth B], F [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.83 | α = 90 |
b = 109.342 | β = 90 |
c = 180.992 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |