SARS-CoV-2 main protease (Mpro) complex with AC1115
DuPrez, K.T., Chao, A., Han, F.Q.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
3C-like proteinase nsp5 | 306 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 0  Gene Names: rep, 1a-1b EC: 3.4.22.69 | ||
UniProt | |||||
Find proteins for P0DTD1 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTD1  Go to UniProtKB:  P0DTD1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DTD1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
W28 (Subject of Investigation/LOI) Query on W28 | B [auth A] | N-[(2S)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-1H-indole-2-carboxamide C22 H30 N4 O4 GSGDUCVRBYFHMQ-BQFCYCMXSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 45.867 | α = 90 |
b = 53.4 | β = 101.111 |
c = 113.373 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Other private | -- |