8TLU

E. coli MraY mutant-T23P


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Synthesis of lipid-linked precursors of the bacterial cell wall is governed by a feedback control mechanism in Pseudomonas aeruginosa.

Marmont, L.S.Orta, A.K.Baileeves, B.W.A.Sychantha, D.Fernandez-Galliano, A.Li, Y.E.Greene, N.G.Corey, R.A.Stansfeld, P.J.Clemons Jr., W.M.Bernhardt, T.G.

(2024) Nat Microbiol 9: 763-775

  • DOI: https://doi.org/10.1038/s41564-024-01603-2
  • Primary Citation of Related Structures:  
    8TLU

  • PubMed Abstract: 

    Many bacterial surface glycans such as the peptidoglycan (PG) cell wall are built from monomeric units linked to a polyprenyl lipid carrier. How this limiting carrier is distributed among competing pathways has remained unclear. Here we describe the isolation of hyperactive variants of Pseudomonas aeruginosa MraY, the enzyme that forms the first lipid-linked PG precursor. These variants result in the elevated production of the final PG precursor lipid II in cells and are hyperactive in vitro. The activated MraY variants have substitutions that map to a cavity on the extracellular side of the dimer interface, far from the active site. Our structural and molecular dynamics results suggest that this cavity is a binding site for externalized lipid II. Overall, our results support a model in which excess externalized lipid II allosterically inhibits MraY, providing a feedback mechanism that prevents the sequestration of lipid carrier in the PG biogenesis pathway.


  • Organizational Affiliation

    Department of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Phospho-N-acetylmuramoyl-pentapeptide-transferaseA,
B [auth E]
360Escherichia coli K-12Mutation(s): 1 
Gene Names: mraY
Membrane Entity: Yes 
UniProt
Find proteins for P0A6W3 (Escherichia coli (strain K12))
Explore P0A6W3 
Go to UniProtKB:  P0A6W3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0A6W3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.20.1-4487
RECONSTRUCTIONcryoSPARCv3.2.0+210817

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM114611
The G. Harold and Leila Y. Mathers FoundationUnited Statesto W.M.C.

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-01
    Type: Initial release