Reinstating targeted protein degradation with DCAF1 PROTACs in CRBN PROTAC resistant settings
Schroder, M., Renatus, M., Thoma, C.R.(2023) bioRxiv 
Experimental Data Snapshot
Starting Model: experimental
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(2023) bioRxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DDB1- and CUL4-associated factor 1 | A [auth P] | 318 | Homo sapiens | Mutation(s): 1  Gene Names: DCAF1, KIAA0800, RIP, VPRBP EC: 2.7.11.1 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y4B6 (Homo sapiens) Explore Q9Y4B6  Go to UniProtKB:  Q9Y4B6 | |||||
PHAROS:  Q9Y4B6 GTEx:  ENSG00000145041  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9Y4B6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
VUF (Subject of Investigation/LOI) Query on VUF | B [auth P], C [auth P] | 1-[4-[4-(2-azanylethylamino)-2-[1-(4-chlorophenyl)cyclohexyl]quinazolin-7-yl]piperazin-1-yl]ethanone C28 H35 Cl N6 O GGEKTDCCHNVLNE-UHFFFAOYSA-N | |||
EDO Query on EDO | D [auth P], E [auth P], F [auth P], G [auth P] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 81.577 | α = 90 |
b = 81.577 | β = 90 |
c = 234.132 | γ = 120 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data scaling |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |