8HBG

FMDV (A/TUR/14/98) in complex with M678F

• PDB DOI: https://doi.org/10.2210/pdb8HBG/pdb
• EM Map EMD-34630: EMDB EMDataResource

• Classification: VIRUS
• Organism(s): Foot-and-mouth disease virus A, Lama glama
• Expression System: Yeast centromeric expression vector p416TEF
• Mutation(s): No 


• Deposited: 2022-10-28 Released: 2023-11-01 
• Deposition Author(s): Li, H.Z., Dong, H., Liu, P.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.60 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structural and in vivo studies of neutralizing antibody topographical classifications reveal mechanisms underlying differences in immunogenicity and antigenicity between 146S and 12S of foot-and-mouth disease virus

Li, H.Z., Dong, H., Liu, P.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Hetero 300-mer - A60B60C60D60E60 Pseudo Symmetry: Icosahedral - I  (Explore in 3D)
Pseudo Stoichiometry: Hetero 300-mer - A120B60C60D60 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 93.5 kDa 
• Atom Count: 6,076 
• Modelled Residue Count: 783 
• Deposited Residue Count: 854 
• Unique protein chains: 5

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
VP1 of capsid protein	A	211	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for A0A7D5BJ70 (Foot-and-mouth disease virus A) Explore A0A7D5BJ70  Go to UniProtKB:  A0A7D5BJ70

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
VP2 of capsid protein	B	218	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for A0A7D5BJ70 (Foot-and-mouth disease virus A) Explore A0A7D5BJ70  Go to UniProtKB:  A0A7D5BJ70

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
VP3 of capsid protein	C	221	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for A0A7D5BJ70 (Foot-and-mouth disease virus A) Explore A0A7D5BJ70  Go to UniProtKB:  A0A7D5BJ70

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
VP4 of capsid protein	D	85	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for A0A7D5BJ70 (Foot-and-mouth disease virus A) Explore A0A7D5BJ70  Go to UniProtKB:  A0A7D5BJ70

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
M678F nab	E	119	Lama glama	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.60 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-11-01 
Deposition Author(s): Li, H.Z., Dong, H., Liu, P.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2023-11-01
  Type: Initial release