Crystal structure of Hepes and Mg bound 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase from Klebsiella aerogenes
Lovell, S., Liu, L., Seibold, S., Battaile, K.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Orotidine 5'-phosphate decarboxylase | 253 | Klebsiella aerogenes | Mutation(s): 0  Gene Names: pyrF, BXQ27_18035, HV316_11080 EC: 4.1.1.23 | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EPE Query on EPE | G [auth A], N [auth C], S [auth E] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
MPD Query on MPD | K [auth A], M [auth B], R [auth C], W [auth E], X [auth F] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
MG Query on MG | H [auth A] I [auth A] J [auth A] L [auth B] O [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MLZ Query on MLZ | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C7 H16 N2 O2 | LYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 83.517 | α = 90 |
b = 70.141 | β = 93.34 |
c = 115.985 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | HHSN272201700059C |
National Institutes of Health/Office of the Director | United States | S10OD030394 |