Interaction of sliding clamp with mycobacterial polymerases
Kapur, M.K., Gray, O.J., Honzatko, R.H., Nelson, S.N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta sliding clamp | A, B, E [auth C], F [auth D] | 397 | Mycolicibacterium thermoresistibile | Mutation(s): 0  Gene Names: dnaN, RMCT_1113 | |
UniProt | |||||
Find proteins for G7CIP4 (Mycolicibacterium thermoresistibile (strain ATCC 19527 / DSM 44167 / CIP 105390 / JCM 6362 / NCTC 10409 / 316)) Explore G7CIP4  Go to UniProtKB:  G7CIP4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | G7CIP4 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase IV 1 peptide | C [auth E], D [auth F], G, H | 6 | Mycobacterium tuberculosis | Mutation(s): 0  EC: 2.7.7.7 | |
UniProt | |||||
Find proteins for P9WNT3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WNT3  Go to UniProtKB:  P9WNT3 | |||||
Entity Groups   | |||||
UniProt Group | P9WNT3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 (Subject of Investigation/LOI) Query on SO4 | I [auth A], J [auth B], K [auth B], Q [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ACE (Subject of Investigation/LOI) Query on ACE | M [auth E], O [auth F], R [auth G], T [auth H] | ACETYL GROUP C2 H4 O IKHGUXGNUITLKF-UHFFFAOYSA-N | |||
CL (Subject of Investigation/LOI) Query on CL | L [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NH2 (Subject of Investigation/LOI) Query on NH2 | N [auth E], P [auth F], S [auth G], U [auth H] | AMINO GROUP H2 N QGZKDVFQNNGYKY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 71.072 | α = 82.769 |
b = 73.944 | β = 77.57 |
c = 81.343 | γ = 87.746 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Other government | United States | -- |