Observation of N7-GTP in nsp16-nsp10 Sars-CoV
Ferron, F., Canard, B., Debarnot, C., Coutard, B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Non-structural protein 7 | 292 | Severe acute respiratory syndrome-related coronavirus | Mutation(s): 0  Gene Names: rep, 1a-1b | ![]() | |
UniProt | |||||
Find proteins for P0C6X7 (Severe acute respiratory syndrome coronavirus) Explore P0C6X7  Go to UniProtKB:  P0C6X7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0C6X7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Non-structural protein 7 | 122 | Severe acute respiratory syndrome-related coronavirus | Mutation(s): 0  Gene Names: rep, 1a-1b | ![]() | |
UniProt | |||||
Find proteins for P0C6X7 (Severe acute respiratory syndrome coronavirus) Explore P0C6X7  Go to UniProtKB:  P0C6X7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0C6X7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SRC (Subject of Investigation/LOI) Query on SRC | D [auth A] | [[(2~{R},3~{S},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1,8-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate C11 H20 N5 O14 P3 BUJQMJUTTBGELS-UHTZMRCNSA-N | |||
PEG Query on PEG | C [auth A], E [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
ZN (Subject of Investigation/LOI) Query on ZN | G [auth B], H [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
NA Query on NA | F [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.232 | α = 90 |
b = 185.042 | β = 90 |
c = 128.577 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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European Union (EU) | European Union | VIZIER integrated project (LSHG-CT-2004-511960) |
European Union (EU) | European Union | European FP7 Capacities Project no 228292 |