Download MendeleyStructure of a Fab portion from TKH2
Diskin, R., Borenstein-Katz, A.To be published.
8BF0
Structure of a Fab portion from TKH2
- PDB DOI: https://doi.org/10.2210/pdb8BF0/pdb
- Classification: IMMUNE SYSTEM
- Organism(s): Mus musculus
- Expression System: Homo sapiens
- Mutation(s): No
- Deposited: 2022-10-23 Released: 2023-11-01
- Funding Organization(s): Israel Science Foundation
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.202
- R-Value Work: 0.168
- R-Value Observed: 0.169
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Anti-dectin-1 15E2 light chain | A [auth L] | 213 | Mus musculus | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Anti-lox-1 15C4 heavy chain | B [auth H] | 216 | Mus musculus | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CIT Query on CIT | C [auth L], D [auth L] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | E [auth L], F [auth L] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.202
- R-Value Work: 0.168
- R-Value Observed: 0.169
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 55.259 | α = 90 |
| b = 65.111 | β = 104.55 |
| c = 56.713 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-11-01 Deposition Author(s): Diskin, R., Borenstein-Katz, A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Israel Science Foundation | Israel | 209/20 |
Revision History (Full details and data files)
- Version 1.0: 2023-11-01
Type: Initial release
