Crystal structure of GAPDH complexed with arsenate from Lactiplantibacillus plantarum
Yoneda, K., Kinoshita, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glyceraldehyde-3-phosphate dehydrogenase | 360 | Lactiplantibacillus plantarum | Mutation(s): 0  Gene Names: gap | ![]() | |
UniProt | |||||
Find proteins for Q88YH6 (Lactiplantibacillus plantarum) Explore Q88YH6  Go to UniProtKB:  Q88YH6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q88YH6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD (Subject of Investigation/LOI) Query on NAD | E [auth A], I [auth B], L [auth C], O [auth D] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
ART (Subject of Investigation/LOI) Query on ART | F [auth A], J [auth B], M [auth C], P [auth D] | ARSENATE As O4 DJHGAFSJWGLOIV-UHFFFAOYSA-K | |||
TRS Query on TRS | H [auth A] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O | |||
EDO Query on EDO | G [auth A], K [auth B], N [auth C], Q [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 77.85 | α = 90 |
b = 123.964 | β = 90 |
c = 132.859 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
XDS | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science (JSPS) | Japan | 15K21259 |