The activation mechanism of the itaconic acid-responsive LTTR RipR in the pathogenesis of the foodborne-pathogen Salmonella enterica
Ki, N., Ha, N.-C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
RipR | A [auth B], B [auth C] | 208 | Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Mutation(s): 0 Gene Names: stmR, hcaR_2 | |
UniProt | |||||
Find proteins for Q9RQ20 (Salmonella typhimurium) Explore Q9RQ20 Go to UniProtKB: Q9RQ20 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9RQ20 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HCI (Subject of Investigation/LOI) Query on HCI | D [auth B] | HYDROCINNAMIC ACID C9 H10 O2 XMIIGOLPHOKFCH-UHFFFAOYSA-N | |||
GLY Query on GLY | C [auth B], G [auth C] | GLYCINE C2 H5 N O2 DHMQDGOQFOQNFH-UHFFFAOYSA-N | |||
CL Query on CL | E [auth B], F [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 83.107 | α = 90 |
b = 83.107 | β = 90 |
c = 172.199 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
PHENIX | phasing |
HKL-2000 | data reduction |
Funding Organization | Location | Grant Number |
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Not funded | -- |