structure of TYLCV Rep complexed with ssDNA
Zhang, S.Y., Wang, C.N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Replication-associated protein | 112 | Tomato yellow leaf curl virus | Mutation(s): 1  Gene Names: AC1 EC: 3.1.21 | ||
UniProt | |||||
Find proteins for H6WA92 (Tomato yellow leaf curl virus) Explore H6WA92  Go to UniProtKB:  H6WA92 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H6WA92 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-((DT)P*(DA)P*(DA)P*(DT)P*(DA)P*(DT)P*(DT)P*(DA)*(DC)P*)-3') | B [auth C] | 9 | Tomato yellow leaf curl virus-IL [MX: SLP:11] | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MN (Subject of Investigation/LOI) Query on MN | C [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 67.976 | α = 90 |
b = 67.976 | β = 90 |
c = 40.433 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Not funded | China | -- |