Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS) through Mn coordination
Wu, S., Gabelli, S.B., Sohn, J.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclic GMP-AMP synthase | A, B [auth C] | 364 | Mus musculus | Mutation(s): 0  Gene Names: Cgas, Mb21d1 EC: 2.7.7.86 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8C6L5 (Mus musculus) Explore Q8C6L5  Go to UniProtKB:  Q8C6L5 | |||||
IMPC:  MGI:2442261 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8C6L5 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
Palindromic DNA18 | C [auth E], D [auth F], E [auth I], F [auth J] | 18 | DNA molecule | ![]() | |
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
APC (Subject of Investigation/LOI) Query on APC | G [auth A], K [auth C] | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER C11 H18 N5 O12 P3 CAWZRIXWFRFUQB-IOSLPCCCSA-N | |||
ZN Query on ZN | H [auth A], L [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
MN (Subject of Investigation/LOI) Query on MN | I [auth A], J [auth A], M [auth C], N [auth C] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 77.093 | α = 90 |
b = 97.882 | β = 90 |
c = 142.271 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
MOLREP | phasing |
Coot | model building |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | -- |