Development of PRPK Directed Phthalimides
Seo, H.-S., Mizutani, T., Hideshima, T., Vangos, N.E., Zhang, T., Anderson, K.C., Gray, N.S., Dhe-Paganon, S.(2021) bioRxiv 
Experimental Data Snapshot
Starting Models: experimental
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(2021) bioRxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
EKC/KEOPS complex subunit TP53RK | 255 | Homo sapiens | Mutation(s): 0  Gene Names: TP53RK, C20orf64, PRPK EC: 3.6 (PDB Primary Data), 2.7.11.1 (PDB Primary Data) | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q96S44 (Homo sapiens) Explore Q96S44  Go to UniProtKB:  Q96S44 | |||||
PHAROS:  Q96S44 GTEx:  ENSG00000172315  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q96S44 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
EKC/KEOPS complex subunit TPRKB | 178 | Homo sapiens | Mutation(s): 0  Gene Names: TPRKB, CGI-121, My019 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y3C4 (Homo sapiens) Explore Q9Y3C4  Go to UniProtKB:  Q9Y3C4 | |||||
PHAROS:  Q9Y3C4 GTEx:  ENSG00000144034  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9Y3C4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DQ4 (Subject of Investigation/LOI) Query on DQ4 | E [auth A], G [auth C] | 5-amino-2-[(3R)-2,6-dioxopiperidin-3-yl]-1H-isoindole-1,3(2H)-dione C13 H11 N3 O4 IICWMVJMJVXCLY-SECBINFHSA-N | |||
FLC Query on FLC | F [auth A], H [auth C] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 295.77 | α = 90 |
b = 47.63 | β = 96.77 |
c = 62.14 | γ = 90 |
Software Name | Purpose |
---|---|
xia2 | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
xia2 | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | -- |