Structure of the Pfp1 protease from a hypothermophilic archer, Thermococcus thioreducens, in two crystal forms
Larson, S.B., McPherson, A.(2017) Acta Crystallogr D73: 749-756
Experimental Data Snapshot
Starting Model: experimental
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(2017) Acta Crystallogr D73: 749-756
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidase | 166 | Thermococcus thioreducens | Mutation(s): 0  Gene Names: AMR53_10535 | ![]() | |
UniProt | |||||
Find proteins for A0A0Q2XKL6 (Thermococcus thioreducens) Explore A0A0Q2XKL6  Go to UniProtKB:  A0A0Q2XKL6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0Q2XKL6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MPD Query on MPD | E [auth A], F [auth A], G [auth B], I [auth D] | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | |||
PO4 Query on PO4 | H [auth C], J [auth D] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
OCS Query on OCS | A, B, C, D | L-PEPTIDE LINKING | C3 H7 N O5 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 151.03 | α = 90 |
b = 151.03 | β = 90 |
c = 80.716 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |