7QCA

Spraguea lophii ribosome

• PDB DOI: https://doi.org/10.2210/pdb7QCA/pdb
• NAKB: 7QCA
• EM Map EMD-13892: EMDB EMDataResource

• Classification: RIBOSOME
• Organism(s): Spraguea lophii 42_110
• Expression System: Spraguea lophii
• Mutation(s): No 


• Deposited: 2021-11-22 Released: 2022-11-30 
• Deposition Author(s): Gil Diez, P., McLaren, M., Isupov, M.N., Daum, B., Conners, R., Williams, B.
• Funding Organization(s): Wellcome Trust

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.79 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental

Literature

CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state

McLaren, M., Conners, R., Isupov, M.N., Gil-Diez, P., Gambelli, L., Gold, V.A.M., Walter, A., Connell, S.R., Williams, B., Daum, B.

(2023) Nat Microbiol 

• DOI: https://doi.org/10.1038/s41564-023-01469-w

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 71-mer - AA1AB1AC1AD1AE1AF1AG1AH1AI1AJ1AK1AL1AM1AN1AO1AP1AQ1AR1AS1AT1AU1AV1AW1AX1AY1AZ1Aa1Ab1Ac1Ad1Ae1Af1Ag1Ah1Ai1Aj1Ak1Al1Am1An1Ao1Ap1Aq1Ar1As1At1Au1Av1Aw1Ax1Ay1Az1BA1BB1BC1BD1BE1BF1BG1BH1BI1BJ1BK1BL1BM1BN1BO1BP1BQ1BR1BS1 Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 71-mer - AA2AB1AC1AD1AE1AF1AG1AH1AI1AJ1AK1AL1AM1AN1AO1AP1AQ1AR1AS1AT1AU1AV1AW1AX1AY1AZ1Aa1Ab1Ac1Ad1Ae1Af1Ag1Ah1Ai1Aj1Ak1Al1Am1An1Ao1Ap1Aq1Ar1As1At1Au1Av1Aw1Ax1Ay1Az1BA1BB1BC1BD1BE1BF1BG1BH1BI1BJ1BK1BL1BM1BN1BO1BP1BQ1BR1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 2,642.12 kDa 
• Atom Count: 171,001 
• Modelled Residue Count: 14,601 
• Deposited Residue Count: 15,430 
• Unique protein chains: 71
• Unique nucleic acid chains: 3

Macromolecules

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L8	C [auth LA0]	246	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_78

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
uL15 LAA	D [auth LAA]	147	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L3	E [auth LB0]	392	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_68
UniProt
Find proteins for S7XFB1 (Spraguea lophii (strain 42_110)) Explore S7XFB1  Go to UniProtKB:  S7XFB1

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L4	F [auth LC0]	328	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_73
UniProt
Find proteins for S7WCM8 (Spraguea lophii (strain 42_110)) Explore S7WCM8  Go to UniProtKB:  S7WCM8

Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L3	G [auth LCC]	110	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_69
UniProt
Find proteins for S7WAY0 (Spraguea lophii (strain 42_110)) Explore S7WAY0  Go to UniProtKB:  S7WAY0

Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L5	H [auth LD0]	291	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_75
UniProt
Find proteins for S7XIG7 (Spraguea lophii (strain 42_110)) Explore S7XIG7  Go to UniProtKB:  S7XIG7

Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L31	I [auth LDD]	110	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2196
UniProt
Find proteins for S7XW48 (Spraguea lophii (strain 42_110)) Explore S7XW48  Go to UniProtKB:  S7XW48

Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L6	J [auth LE0]	171	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2210
UniProt
Find proteins for S7W5S3 (Spraguea lophii (strain 42_110)) Explore S7W5S3  Go to UniProtKB:  S7W5S3

Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L32	K [auth LEE]	139	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_70
UniProt
Find proteins for S7XKE0 (Spraguea lophii (strain 42_110)) Explore S7XKE0  Go to UniProtKB:  S7XKE0

Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L7	L [auth LF0]	235	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_76
UniProt
Find proteins for S7W946 (Spraguea lophii (strain 42_110)) Explore S7W946  Go to UniProtKB:  S7W946

Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L35a	M [auth LFF]	111	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_71
UniProt
Find proteins for S7W662 (Spraguea lophii (strain 42_110)) Explore S7W662  Go to UniProtKB:  S7W662

Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L8	N [auth LG0]	206	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_77
UniProt
Find proteins for S7XU63 (Spraguea lophii (strain 42_110)) Explore S7XU63  Go to UniProtKB:  S7XU63

Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein L34	O [auth LGG]	106	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1567
UniProt
Find proteins for S7W7C6 (Spraguea lophii (strain 42_110)) Explore S7W7C6  Go to UniProtKB:  S7W7C6

Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L9	P [auth LH0]	187	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_79
UniProt
Find proteins for S7XRZ9 (Spraguea lophii (strain 42_110)) Explore S7XRZ9  Go to UniProtKB:  S7XRZ9

Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal L29 protein	Q [auth LHH]	119	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2194

Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
S60 ribosomal protein L10	R [auth LI0]	218	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1601
UniProt
Find proteins for S7WBF8 (Spraguea lophii (strain 42_110)) Explore S7WBF8  Go to UniProtKB:  S7WBF8

Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L36	S [auth LII]	98	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_72
UniProt
Find proteins for S7WED1 (Spraguea lophii (strain 42_110)) Explore S7WED1  Go to UniProtKB:  S7WED1

Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L11	T [auth LJ0]	171	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_56
UniProt
Find proteins for S7WB69 (Spraguea lophii (strain 42_110)) Explore S7WB69  Go to UniProtKB:  S7WB69

Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
eL37 LJJ	U [auth LJJ]	92	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L13	V [auth LL0]	165	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_32
UniProt
Find proteins for S7XVM9 (Spraguea lophii (strain 42_110)) Explore S7XVM9  Go to UniProtKB:  S7XVM9

Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L39	W [auth LLL]	52	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2202
UniProt
Find proteins for S7XTP1 (Spraguea lophii (strain 42_110)) Explore S7XTP1  Go to UniProtKB:  S7XTP1

Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
eL14 LM0	X [auth LM0]	122	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1179
UniProt
Find proteins for S7XVN9 (Spraguea lophii (strain 42_110)) Explore S7XVN9  Go to UniProtKB:  S7XVN9

Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin	Y [auth LMM]	127	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2019
UniProt
Find proteins for S7XSQ3 (Spraguea lophii (strain 42_110)) Explore S7XSQ3  Go to UniProtKB:  S7XSQ3

Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein L15	Z [auth LN0]	204	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1565
UniProt
Find proteins for S7W7A2 (Spraguea lophii (strain 42_110)) Explore S7W7A2  Go to UniProtKB:  S7W7A2

Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein L13A	AA [auth LO0]	198	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1564
UniProt
Find proteins for S7XUD8 (Spraguea lophii (strain 42_110)) Explore S7XUD8  Go to UniProtKB:  S7XUD8

Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L44	BA [auth LOO]	104	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_74
UniProt
Find proteins for S7XL20 (Spraguea lophii (strain 42_110)) Explore S7XL20  Go to UniProtKB:  S7XL20

Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L17	CA [auth LP0]	167	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_58
UniProt
Find proteins for S7WDR4 (Spraguea lophii (strain 42_110)) Explore S7WDR4  Go to UniProtKB:  S7WDR4

Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L37a	DA [auth LPP]	89	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2590

Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L18	EA [auth LQ0]	183	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_59
UniProt
Find proteins for S7WAI2 (Spraguea lophii (strain 42_110)) Explore S7WAI2  Go to UniProtKB:  S7WAI2

Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L19	FA [auth LR0]	168	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_60
UniProt
Find proteins for S7WBY9 (Spraguea lophii (strain 42_110)) Explore S7WBY9  Go to UniProtKB:  S7WBY9

Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L20	GA [auth LS0]	171	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_61
UniProt
Find proteins for S7WAG4 (Spraguea lophii (strain 42_110)) Explore S7WAG4  Go to UniProtKB:  S7WAG4

Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
60s ribosomal protein L21	HA [auth LT0]	158	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_62
UniProt
Find proteins for S7W8F6 (Spraguea lophii (strain 42_110)) Explore S7W8F6  Go to UniProtKB:  S7W8F6

Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L22	IA [auth LU0]	113	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_63
UniProt
Find proteins for S7W958 (Spraguea lophii (strain 42_110)) Explore S7W958  Go to UniProtKB:  S7W958

Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein L23	JA [auth LV0]	142	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2233
UniProt
Find proteins for S7XLC4 (Spraguea lophii (strain 42_110)) Explore S7XLC4  Go to UniProtKB:  S7XLC4

Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein L24E	KA [auth LW0]	131	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1566
UniProt
Find proteins for S7XSY2 (Spraguea lophii (strain 42_110)) Explore S7XSY2  Go to UniProtKB:  S7XSY2

Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L23a	LA [auth LX0]	113	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_64
UniProt
Find proteins for S7XFW8 (Spraguea lophii (strain 42_110)) Explore S7XFW8  Go to UniProtKB:  S7XFW8

Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L26	MA [auth LY0]	131	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_65
UniProt
Find proteins for S7W884 (Spraguea lophii (strain 42_110)) Explore S7W884  Go to UniProtKB:  S7W884

Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
60S ribosomal protein L27	NA [auth LZ0]	153	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_66
UniProt
Find proteins for S7XU08 (Spraguea lophii (strain 42_110)) Explore S7XU08  Go to UniProtKB:  S7XU08

Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S0	PA [auth SA0]	233	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_25
UniProt
Find proteins for S7W8R1 (Spraguea lophii (strain 42_110)) Explore S7W8R1  Go to UniProtKB:  S7W8R1

Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S26	QA [auth SAA]	102	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1572
UniProt
Find proteins for S7W9M7 (Spraguea lophii (strain 42_110)) Explore S7W9M7  Go to UniProtKB:  S7W9M7

Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
eS1 SB0	RA [auth SB0]	230	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
eS27 SBB	SA [auth SBB]	82	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S2	TA [auth SC0]	248	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2189
UniProt
Find proteins for S7W7R5 (Spraguea lophii (strain 42_110)) Explore S7W7R5  Go to UniProtKB:  S7W7R5

Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
eS28 SCC	UA [auth SCC]	65	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S3	VA [auth SD0]	242	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_40
UniProt
Find proteins for S7WAW0 (Spraguea lophii (strain 42_110)) Explore S7WAW0  Go to UniProtKB:  S7WAW0

Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S29	WA [auth SDD]	65	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2174
UniProt
Find proteins for S7XJB1 (Spraguea lophii (strain 42_110)) Explore S7XJB1  Go to UniProtKB:  S7XJB1

Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S4	XA [auth SE0]	280	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_43
UniProt
Find proteins for S7XG51 (Spraguea lophii (strain 42_110)) Explore S7XG51  Go to UniProtKB:  S7XG51

Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
eS30 SEE	YA [auth SEE]	60	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S5	ZA [auth SF0]	195	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_44
UniProt
Find proteins for S7W4M9 (Spraguea lophii (strain 42_110)) Explore S7W4M9  Go to UniProtKB:  S7W4M9

Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin/40s ribosomal protein S27a fusion	AB [auth SFF]	150	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2039
UniProt
Find proteins for S7W9X5 (Spraguea lophii (strain 42_110)) Explore S7W9X5  Go to UniProtKB:  S7W9X5

Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S6	BB [auth SG0]	230	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_45

Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details	Image
Guanine nucleotide binding protein beta subunit	CB [auth SGG]	326	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2232
UniProt
Find proteins for S7XVG3 (Spraguea lophii (strain 42_110)) Explore S7XVG3  Go to UniProtKB:  S7XVG3

Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S7	DB [auth SH0]	164	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_46
UniProt
Find proteins for S7XV29 (Spraguea lophii (strain 42_110)) Explore S7XV29  Go to UniProtKB:  S7XV29

Entity ID: 57
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S8	EB [auth SI0]	173	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_47
UniProt
Find proteins for S7XGW2 (Spraguea lophii (strain 42_110)) Explore S7XGW2  Go to UniProtKB:  S7XGW2

Entity ID: 58
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S9	FB [auth SJ0]	184	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_48
UniProt
Find proteins for S7W8E3 (Spraguea lophii (strain 42_110)) Explore S7W8E3  Go to UniProtKB:  S7W8E3

Entity ID: 59
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S10	GB [auth SK0]	107	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_26
UniProt
Find proteins for S7XU48 (Spraguea lophii (strain 42_110)) Explore S7XU48  Go to UniProtKB:  S7XU48

Entity ID: 60
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S11	HB [auth SL0]	155	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_27
UniProt
Find proteins for S7W8R0 (Spraguea lophii (strain 42_110)) Explore S7W8R0  Go to UniProtKB:  S7W8R0

Entity ID: 61
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S12	IB [auth SM0]	130	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_28
UniProt
Find proteins for S7W7D2 (Spraguea lophii (strain 42_110)) Explore S7W7D2  Go to UniProtKB:  S7W7D2

Entity ID: 62
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S13	JB [auth SN0]	143	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_29
UniProt
Find proteins for S7XVZ9 (Spraguea lophii (strain 42_110)) Explore S7XVZ9  Go to UniProtKB:  S7XVZ9

Entity ID: 63
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S14	KB [auth SO0]	135	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_30
UniProt
Find proteins for S7W6I0 (Spraguea lophii (strain 42_110)) Explore S7W6I0  Go to UniProtKB:  S7W6I0

Entity ID: 64
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein S19	LB [auth SP0]	163	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1570
UniProt
Find proteins for S7XKY9 (Spraguea lophii (strain 42_110)) Explore S7XKY9  Go to UniProtKB:  S7XKY9

Entity ID: 65
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S16	MB [auth SQ0]	143	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2103
UniProt
Find proteins for S7WDU9 (Spraguea lophii (strain 42_110)) Explore S7WDU9  Go to UniProtKB:  S7WDU9

Entity ID: 66
Molecule	Chains	Sequence Length	Organism	Details	Image
eS17 SR0	NB [auth SR0]	120	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 67
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S18	OB [auth SS0]	160	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_33
UniProt
Find proteins for S7XJA1 (Spraguea lophii (strain 42_110)) Explore S7XJA1  Go to UniProtKB:  S7XJA1

Entity ID: 68
Molecule	Chains	Sequence Length	Organism	Details	Image
40S Ribosomal protein S19	PB [auth ST0]	143	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_34
UniProt
Find proteins for S7W7P5 (Spraguea lophii (strain 42_110)) Explore S7W7P5  Go to UniProtKB:  S7W7P5

Entity ID: 69
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S20	QB [auth SU0]	119	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_35
UniProt
Find proteins for S7W986 (Spraguea lophii (strain 42_110)) Explore S7W986  Go to UniProtKB:  S7W986

Entity ID: 70
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein S21E	RB [auth SV0]	67	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_2726
UniProt
Find proteins for S7WAC1 (Spraguea lophii (strain 42_110)) Explore S7WAC1  Go to UniProtKB:  S7WAC1

Entity ID: 71
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S15A	SB [auth SW0]	128	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_31
UniProt
Find proteins for S7XK92 (Spraguea lophii (strain 42_110)) Explore S7XK92  Go to UniProtKB:  S7XK92

Entity ID: 72
Molecule	Chains	Sequence Length	Organism	Details	Image
uS12 SX0	TB [auth SX0]	141	Spraguea lophii 42_110	Mutation(s): 0

Entity ID: 73
Molecule	Chains	Sequence Length	Organism	Details	Image
40s ribosomal protein s24	UB [auth SY0]	146	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_37
UniProt
Find proteins for S7W8J5 (Spraguea lophii (strain 42_110)) Explore S7W8J5  Go to UniProtKB:  S7W8J5

Entity ID: 74
Molecule	Chains	Sequence Length	Organism	Details	Image
40S ribosomal protein S25	VB [auth SZ0]	128	Spraguea lophii 42_110	Mutation(s): 0  Gene Names: SLOPH_1571
UniProt
Find proteins for S7WAV8 (Spraguea lophii (strain 42_110)) Explore S7WAV8  Go to UniProtKB:  S7WAV8

Entity ID: 1
Molecule	Chains	Length	Organism	Image
RNA 23S	A [auth L50]	2,618	Spraguea lophii 42_110

Entity ID: 2
Molecule	Chains	Length	Organism	Image
RNA 5S	B [auth L70]	119	Spraguea lophii 42_110

Entity ID: 41
Molecule	Chains	Length	Organism	Image
RNA SSU	OA [auth S60]	1,368	Spraguea lophii 42_110

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN (Subject of Investigation/LOI)	BM [auth LOO], CM [auth LPP], QP [auth SAA], RP [auth SBB], SP [auth SDD], TP [auth SFF], UL [auth LGG], XL [auth LJJ], ZL [auth LMM]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
K	AC [auth L50], AD [auth L50], AE [auth L50], AF [auth L50], AG [auth L50], AH [auth L50], AM [auth LN0], AN [auth S60], BC [auth L50], BD [auth L50], BE [auth L50], BF [auth L50], BG [auth L50], BH [auth L50], BN [auth S60], CC [auth L50], CD [auth L50], CE [auth L50], CF [auth L50], CG [auth L50], CH [auth L50], CN [auth S60], DC [auth L50], DD [auth L50], DE [auth L50], DF [auth L50], DG [auth L50], DH [auth L50], DN [auth S60], EC [auth L50], ED [auth L50], EE [auth L50], EF [auth L50], EG [auth L50], EH [auth L50], EM [auth S60], EN [auth S60], FC [auth L50], FD [auth L50], FE [auth L50], FF [auth L50], FG [auth L50], FH [auth L50], FM [auth S60], FN [auth S60], GC [auth L50], GD [auth L50], GE [auth L50], GF [auth L50], GG [auth L50], GH [auth L50], GM [auth S60], GN [auth S60], HC [auth L50], HD [auth L50], HE [auth L50], HF [auth L50], HG [auth L50], HH [auth L50], HM [auth S60], HN [auth S60], IC [auth L50], ID [auth L50], IE [auth L50], IF [auth L50], IG [auth L50], IH [auth L50], IM [auth S60], IN [auth S60], JC [auth L50], JD [auth L50], JE [auth L50], JF [auth L50], JG [auth L50], JH [auth L50], JM [auth S60], JN [auth S60], KC [auth L50], KD [auth L50], KE [auth L50], KF [auth L50], KG [auth L50], KH [auth L50], KM [auth S60], KN [auth S60], LC [auth L50], LD [auth L50], LE [auth L50], LF [auth L50], LG [auth L50], LM [auth S60], LN [auth S60], MC [auth L50], MD [auth L50], ME [auth L50], MF [auth L50], MG [auth L50], MM [auth S60], MN [auth S60], NC [auth L50], ND [auth L50], NE [auth L50], NF [auth L50], NG [auth L50], NM [auth S60], NN [auth S60], OC [auth L50], OD [auth L50], OE [auth L50], OF [auth L50], OG [auth L50], OM [auth S60], ON [auth S60], PC [auth L50], PD [auth L50], PE [auth L50], PF [auth L50], PG [auth L50], PL [auth LA0], PM [auth S60], PN [auth S60], QC [auth L50], QD [auth L50], QE [auth L50], QF [auth L50], QG [auth L50], QL [auth LA0], QM [auth S60], QN [auth S60], RC [auth L50], RD [auth L50], RE [auth L50], RF [auth L50], RG [auth L50], RM [auth S60], RN [auth S60], SC [auth L50], SD [auth L50], SE [auth L50], SF [auth L50], SG [auth L50], SL [auth LEE], SM [auth S60], SN [auth S60], TC [auth L50], TD [auth L50], TE [auth L50], TF [auth L50], TG [auth L50], TM [auth S60], TN [auth S60], UC [auth L50], UD [auth L50], UE [auth L50], UF [auth L50], UG [auth L50], UM [auth S60], UN [auth S60], VC [auth L50], VD [auth L50], VE [auth L50], VF [auth L50], VG [auth L50], VM [auth S60], VN [auth S60], VP [auth SN0], WB [auth L50], WC [auth L50], WD [auth L50], WE [auth L50], WF [auth L50], WG [auth L50], WM [auth S60], WP [auth SN0], XB [auth L50], XC [auth L50], XD [auth L50], XE [auth L50], XF [auth L50], XG [auth L50], XM [auth S60], XP [auth SN0], YB [auth L50], YC [auth L50], YD [auth L50], YE [auth L50], YF [auth L50], YG [auth L50], YL [auth LLL], YM [auth S60], YP [auth SO0], ZB [auth L50], ZC [auth L50], ZD [auth L50], ZE [auth L50], ZF [auth L50], ZG [auth L50], ZM [auth S60], ZP [auth SO0]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N
MG	AI [auth L50], AJ [auth L50], AK [auth L50], AL [auth L50], AO [auth S60], AP [auth S60], BI [auth L50], BJ [auth L50], BK [auth L50], BL [auth L50], BO [auth S60], BP [auth S60], CI [auth L50], CJ [auth L50], CK [auth L50], CL [auth L50], CO [auth S60], CP [auth S60], DI [auth L50], DJ [auth L50], DK [auth L50], DL [auth L50], DM [auth LV0], DO [auth S60], DP [auth S60], EI [auth L50], EJ [auth L50], EK [auth L50], EL [auth L50], EO [auth S60], EP [auth S60], FI [auth L50], FJ [auth L50], FK [auth L50], FL [auth L50], FO [auth S60], FP [auth S60], GI [auth L50], GJ [auth L50], GK [auth L50], GL [auth L50], GO [auth S60], GP [auth S60], HI [auth L50], HJ [auth L50], HK [auth L50], HL [auth L50], HO [auth S60], HP [auth S60], II [auth L50], IJ [auth L50], IK [auth L50], IL [auth L50], IO [auth S60], IP [auth S60], JI [auth L50], JJ [auth L50], JK [auth L50], JL [auth L50], JO [auth S60], JP [auth S60], KI [auth L50], KJ [auth L50], KK [auth L50], KL [auth L50], KO [auth S60], KP [auth S60], LH [auth L50], LI [auth L50], LJ [auth L50], LK [auth L50], LL [auth L70], LO [auth S60], LP [auth S60], MH [auth L50], MI [auth L50], MJ [auth L50], MK [auth L50], ML [auth L70], MO [auth S60], MP [auth S60], NH [auth L50], NI [auth L50], NJ [auth L50], NK [auth L50], NL [auth L70], NO [auth S60], NP [auth S60], OH [auth L50], OI [auth L50], OJ [auth L50], OK [auth L50], OL [auth L70], OO [auth S60], OP [auth S60], PH [auth L50], PI [auth L50], PJ [auth L50], PK [auth L50], PO [auth S60], PP [auth S60], QH [auth L50], QI [auth L50], QJ [auth L50], QK [auth L50], QO [auth S60], RH [auth L50], RI [auth L50], RJ [auth L50], RK [auth L50], RL [auth LB0], RO [auth S60], SH [auth L50], SI [auth L50], SJ [auth L50], SK [auth L50], SO [auth S60], TH [auth L50], TI [auth L50], TJ [auth L50], TK [auth L50], TL [auth LF0], TO [auth S60], UH [auth L50], UI [auth L50], UJ [auth L50], UK [auth L50], UO [auth S60], UP [auth SI0], VH [auth L50], VI [auth L50], VJ [auth L50], VK [auth L50], VL [auth LII], VO [auth S60], WH [auth L50], WI [auth L50], WJ [auth L50], WK [auth L50], WL [auth LJJ], WN [auth S60], WO [auth S60], XH [auth L50], XI [auth L50], XJ [auth L50], XK [auth L50], XN [auth S60], XO [auth S60], YH [auth L50], YI [auth L50], YJ [auth L50], YK [auth L50], YN [auth S60], YO [auth S60], ZH [auth L50], ZI [auth L50], ZJ [auth L50], ZK [auth L50], ZN [auth S60], ZO [auth S60]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.79 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	REFMAC
RECONSTRUCTION	RELION	3.1

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2022-11-30 
Deposition Author(s): Gil Diez, P., McLaren, M., Isupov, M.N., Daum, B., Conners, R., Williams, B.

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Funding Organization	Location	Grant Number
Wellcome Trust	United Kingdom	212439/Z/18/Z

Revision History  

• Version 1.0: 2022-11-30
  Type: Initial release
  
• Version 1.1: 2023-12-13
  Changes: Data collection, Database references, Refinement description
• Version 1.2: 2023-12-20
  Changes: Database references