Crystal Structure Analysis of human CDK2 and CCNA2 complex
Seo, H.-S., Dhe-Paganon, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclin-dependent kinase 2 | 303 | Homo sapiens | Mutation(s): 0  Gene Names: CDK2, CDKN2 EC: 2.7.11.22 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P24941 (Homo sapiens) Explore P24941  Go to UniProtKB:  P24941 | |||||
PHAROS:  P24941 GTEx:  ENSG00000123374  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P24941 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cyclin-A2 | 268 | Homo sapiens | Mutation(s): 0  Gene Names: CCNA2, CCN1, CCNA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P20248 (Homo sapiens) Explore P20248  Go to UniProtKB:  P20248 | |||||
PHAROS:  P20248 GTEx:  ENSG00000145386  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P20248 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZGY (Subject of Investigation/LOI) Query on ZGY | E [auth A], F [auth C] | 2-[(5-bromo-2-{4-[(cyanomethyl)sulfamoyl]anilino}pyrimidin-4-yl)amino]-6-fluorobenzamide C19 H15 Br F N7 O3 S JFPLXLDERUBJPU-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
TPO Query on TPO | A, C | L-PEPTIDE LINKING | C4 H10 N O6 P | THR |
Length ( Å ) | Angle ( ˚ ) |
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a = 161.05 | α = 90 |
b = 161.52 | β = 90 |
c = 65.76 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
xia2 | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | -- |