PRA in complex with tubulin
Wu, C.Y., Wang, Y.X.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin alpha-1B chain | 451 | Sus scrofa | Mutation(s): 0  EC: 3.6.5 | ||
UniProt | |||||
Find proteins for Q2XVP4 (Sus scrofa) Explore Q2XVP4  Go to UniProtKB:  Q2XVP4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2XVP4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin beta chain | 445 | Sus scrofa | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for P02554 (Sus scrofa) Explore P02554  Go to UniProtKB:  P02554 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02554 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Stathmin-4 | 143 | Mus musculus | Mutation(s): 0  Gene Names: Stmn4 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P63042 (Mus musculus) Explore P63042  Go to UniProtKB:  P63042 | |||||
IMPC:  MGI:1931224 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63042 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin tyrosine ligase | 384 | Gallus gallus | Mutation(s): 0  Gene Names: TTL | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GTP Query on GTP | G [auth A], N [auth C], Q [auth D] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N | |||
ACP Query on ACP | S [auth F] | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER C11 H18 N5 O12 P3 UFZTZBNSLXELAL-IOSLPCCCSA-N | |||
GDP Query on GDP | L [auth B] | GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N | |||
H1C (Subject of Investigation/LOI) Query on H1C | J [auth B] | methyl ~{N}-(5-butyl-1~{H}-benzimidazol-2-yl)carbamate C13 H17 N3 O2 YRWLZFXJFBZBEY-UHFFFAOYSA-N | |||
MES Query on MES | M [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N | |||
CA Query on CA | I [auth A], P [auth C] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
MG Query on MG | H [auth A], K [auth B], O [auth C], R [auth D], T [auth F] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 105.417 | α = 90 |
b = 158.27 | β = 90 |
c = 180.747 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
PHENIX | phasing |