DdhaB with GDP-mannose
Naismith, J.H., Woodward, L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Thymidine diphospho-4-keto-rhamnose 3,5-epimerase | 183 | Campylobacter jejuni | Mutation(s): 0  Gene Names:  BBR99_05345, D0W34_08620, D5I02_08520, F0H18_08555, F1P94_09915, FRS42_06315, FVZ69_07850, FW031_08545, FW918_03925, FWZ96_07945... EC: 5.1.3.13 | ||
UniProt | |||||
Find proteins for Q6EF58 (Campylobacter jejuni) Explore Q6EF58  Go to UniProtKB:  Q6EF58 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6EF58 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GDD Query on GDD | C [auth A] | GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE C16 H25 N5 O16 P2 MVMSCBBUIHUTGJ-GDJBGNAASA-N | |||
GDP Query on GDP | D [auth A] | GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 48.001 | α = 90 |
b = 67.81 | β = 91.79 |
c = 53.14 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
PDB_EXTRACT | data extraction |
xia2 | data reduction |
xia2 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Wellcome Trust | United Kingdom | 100209/Z/12/Z) |