7WMP

Tail structure of Helicobacter pylori bacteriophage KHP30


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Cryo-EM structure of Helicobacter pylori bacteriophage KHP30

Kamiya, R.Uchiyama, J.Matsuzaki, S.Murata, K.Iwasaki, K.Miyazaki, N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Portal protein602Helicobacter phage KHP30Mutation(s): 0 
UniProt
Find proteins for I7HHN4 (Helicobacter pylori bacteriophage KHP30)
Explore I7HHN4 
Go to UniProtKB:  I7HHN4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI7HHN4
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Adaptor protein gp12195Helicobacter phage KHP30Mutation(s): 0 
UniProt
Find proteins for I7HHN3 (Helicobacter pylori bacteriophage KHP30)
Explore I7HHN3 
Go to UniProtKB:  I7HHN3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI7HHN3
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Nozzle protein gp25265Helicobacter phage KHP30Mutation(s): 0 
UniProt
Find proteins for I7HFX1 (Helicobacter pylori bacteriophage KHP30)
Explore I7HFX1 
Go to UniProtKB:  I7HFX1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI7HFX1
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.0

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of Science (JSPS)Japan15K18521
Japan Society for the Promotion of Science (JSPS)Japan18K06154

Revision History  (Full details and data files)

  • Version 1.0: 2023-03-01
    Type: Initial release
  • Version 1.1: 2024-06-26
    Changes: Data collection