7R6S

Crystal Structure of the Putative Bacteriophage Protein from Stenotrophomonas maltophilia

• PDB DOI: https://doi.org/10.2210/pdb7R6S/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Stenotrophomonas maltophilia K279a
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2021-06-23 Released: 2022-11-09 
• Deposition Author(s): Minasov, G., Shuvalova, L., Kiryukhina, O., Brunzelle, J.S., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 0.231 
• R-Value Work: 0.188 
• R-Value Observed: 0.191 

Literature

Crystal Structure of the Putative Bacteriophage Protein from Stenotrophomonas maltophilia

Minasov, G., Shuvalova, L., Kiryukhina, O., Brunzelle, J.S., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 74.5 kDa 
• Atom Count: 5,215 
• Modelled Residue Count: 634 
• Deposited Residue Count: 674 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative bacteriophage protein	A, B	337	Stenotrophomonas maltophilia K279a	Mutation(s): 0  Gene Names: Smlt2992
UniProt
Find proteins for B2FJG3 (Stenotrophomonas maltophilia (strain K279a)) Explore B2FJG3  Go to UniProtKB:  B2FJG3

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	C [auth A], D [auth A], E [auth B], F [auth B], G [auth B], H [auth B]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 0.231 
• R-Value Work: 0.188 
• R-Value Observed: 0.191 
• Space Group: P 1 2₁ 1
• Diffraction Data: https://doi.org/10.18430/m37r6s

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.436	α = 90
b = 90.67	β = 103.99
c = 72.067	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-3000	data reduction
HKL-3000	data scaling
HKL-3000	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2022-11-09 
Deposition Author(s): Minasov, G., Shuvalova, L., Kiryukhina, O., Brunzelle, J.S., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)

Revision History  

• Version 1.0: 2022-11-09
  Type: Initial release
  
• Version 1.1: 2023-02-01
  Changes: Database references, Structure summary