New structural DNA-Ligase from Thermococcus gammatolerans
Rudino-Pinera, E., Flores-Hernandez, E., Cardona-Felix, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA ligase | 555 | Thermococcus gammatolerans | Mutation(s): 0  Gene Names: lig, TGAM_1718 EC: 6.5.1.6 | ![]() | |
UniProt | |||||
Find proteins for C5A7K8 (Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)) Explore C5A7K8  Go to UniProtKB:  C5A7K8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C5A7K8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AMP (Subject of Investigation/LOI) Query on AMP | C [auth A] | ADENOSINE MONOPHOSPHATE C10 H14 N5 O7 P UDMBCSSLTHHNCD-KQYNXXCUSA-N | |||
PO4 (Subject of Investigation/LOI) Query on PO4 | B [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 91.67 | α = 90 |
b = 92.75 | β = 90 |
c = 98.61 | γ = 90 |
Software Name | Purpose |
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XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |