CASK PDZ domain specificity
Sun, Y.J., Hou, T., Fuentes, E.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peripheral plasma membrane protein CASK | 88 | Homo sapiens | Mutation(s): 0  Gene Names: CASK, LIN2 EC: 2.7.11.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O14936 (Homo sapiens) Explore O14936  Go to UniProtKB:  O14936 | |||||
PHAROS:  O14936 GTEx:  ENSG00000147044  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O14936 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Neurexin-1 | 10 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9ULB1 (Homo sapiens) Explore Q9ULB1  Go to UniProtKB:  Q9ULB1 | |||||
PHAROS:  Q9ULB1 GTEx:  ENSG00000179915  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9ULB1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | G [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 36.328 | α = 90 |
b = 51.177 | β = 97.72 |
c = 72.412 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Blu-Ice | data collection |
XDS | data reduction |
pointless | data scaling |
Aimless | data scaling |
PHASER | phasing |
Coot | model building |
Funding Organization | Location | Grant Number |
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American Heart Association | United States | 15GRNT25740021 |