Crystal structure of an uncharacterized protein from Helicobacter pylori G27
Abendroth, J., Horanyi, P.S., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HepC.19480.a.B1 | 355 | Helicobacter pylori G27 | Mutation(s): 0  Gene Names: HPG27_386 | ||
UniProt | |||||
Find proteins for B5Z6F2 (Helicobacter pylori (strain G27)) Explore B5Z6F2  Go to UniProtKB:  B5Z6F2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B5Z6F2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
IOD Query on IOD | EA [auth B] F [auth A] FA [auth B] G [auth A] GA [auth B] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
EDO Query on EDO | AA [auth B] BA [auth B] C [auth A] CA [auth B] D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL Query on CL | DA [auth B], QA [auth B], X [auth A], Y [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 60.73 | α = 90 |
b = 66.74 | β = 90 |
c = 200.47 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |
ARP/wARP | model building |
Coot | model building |