6JMS

CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.148 
  • R-Value Observed: 0.149 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen

Takashima, T.Fukamizo, T.Ohnuma, T.Numata, T.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Pollen allergen CJP38327Cryptomeria japonicaMutation(s): 0 
EC: 3.2.1.39
UniProt
Find proteins for Q588B8 (Cryptomeria japonica)
Explore Q588B8 
Go to UniProtKB:  Q588B8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ588B8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.148 
  • R-Value Observed: 0.149 
  • Space Group: P 41
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.423α = 90
b = 71.423β = 90
c = 63.447γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-05-06
    Type: Initial release
  • Version 1.1: 2023-11-22
    Changes: Data collection, Database references, Refinement description